PDB entry 3h86
View 3h86 on RCSB PDB site
Description: Crystal structure of adenylate kinase from Methanococcus maripaludis
Class: transferase
Keywords: mesophile, kinase, adenylate kinase, phosphotransferase, ATP-binding, Cytoplasm, Nucleotide-binding, Transferase
Deposited on
2009-04-28, released
2009-10-06
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-12-22, with a file datestamp of
2009-12-18.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.188
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: adenylate kinase
Species: Methanococcus maripaludis [TaxId:39152]
Gene: adk, adkA, MMP1031
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3h86a_ - Chain 'B':
Compound: adenylate kinase
Species: Methanococcus maripaludis [TaxId:39152]
Gene: adk, adkA, MMP1031
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3h86b_ - Chain 'C':
Compound: adenylate kinase
Species: Methanococcus maripaludis [TaxId:39152]
Gene: adk, adkA, MMP1031
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3h86c_ - Chain 'G':
Compound: adenylate kinase
Species: Methanococcus maripaludis [TaxId:39152]
Gene: adk, adkA, MMP1031
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3h86g_ - Heterogens: AP5, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3h86A (A:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr
Sequence, based on observed residues (ATOM records): (download)
>3h86A (A:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3h86B (B:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr
Sequence, based on observed residues (ATOM records): (download)
>3h86B (B:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3h86C (C:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr
Sequence, based on observed residues (ATOM records): (download)
>3h86C (C:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr
- Chain 'G':
Sequence, based on SEQRES records: (download)
>3h86G (G:)
mknkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmr
kldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdiviv
vetdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglv
dnaveelmsvlr
Sequence, based on observed residues (ATOM records): (download)
>3h86G (G:)
knkvvvvtgvpgvggttvtqkamdilseeglnykmvnfgsamfdvaneeglasdrdqmrk
ldpetqkriqkmagrkiaemakespvavdthstvktpkgylpglpawvltelnpdivivv
etdgdeilmrrlsdesrkrdlettasieehqfmnraaamsygvltgatvkivknknglvd
naveelmsvlr