PDB entry 3h5k

View 3h5k on RCSB PDB site
Description: Crystal structure of the ribosome inactivating protein PDL1
Class: hydrolase
Keywords: protein, ribosome inactivation, Disulfide bond, Glycoprotein, Hydrolase, Plant defense, Protein synthesis inhibitor, Toxin
Deposited on 2009-04-22, released 2009-10-13
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: 0.198
AEROSPACI score: 0.64 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribosome-inactivating protein PD-L1/PD-L2
    Species: Phytolacca dioica [TaxId:29725]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3h5ka_
  • Chain 'B':
    Compound: Ribosome-inactivating protein PD-L1/PD-L2
    Species: Phytolacca dioica [TaxId:29725]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d3h5kb_
  • Heterogens: NAG, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3h5kA (A:)
intitydagnttinkyatfmeslrneakdpslqcygipmlpnnsstikyllvklqgasqk
titlmlrrnnlyvmgysdpfngncryhifnditgtertnventlcsssssrdakpinyns
lystlekkaevnsrsqvqlgiqilssdigkisgqssftdkteakfllvaiqmvseaarfk
yienqvktnfnrdfspndkildleenwgkistaihdatngalpkplelknadgtkwivlr
vdeikpdmgllnyvngtcqtt

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3h5kB (B:)
intitydagnttinkyatfmeslrneakdpslqcygipmlpnnsstikyllvklqgasqk
titlmlrrnnlyvmgysdpfngncryhifnditgtertnventlcsssssrdakpinyns
lystlekkaevnsrsqvqlgiqilssdigkisgqssftdkteakfllvaiqmvseaarfk
yienqvktnfnrdfspndkildleenwgkistaihdatngalpkplelknadgtkwivlr
vdeikpdmgllnyvngtcqtt