PDB entry 3ds2

View 3ds2 on RCSB PDB site
Description: HIV-1 capsid C-terminal domain mutant (Y169A)
Class: viral protein
Keywords: hiv, capsid, mutant, assembly, polyprotein, mainly alpha, viral protein
Deposited on 2008-07-11, released 2008-09-02
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.2 Å
R-factor: 0.192
AEROSPACI score: 0.79 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hiv-1 capsid protein
    Species: Human immunodeficiency virus 1 [TaxId:11698]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q72497 (Start-85)
      • engineered (23)
    Domains in SCOPe 2.04: d3ds2a_
  • Chain 'B':
    Compound: hiv-1 capsid protein
    Species: Human immunodeficiency virus 1 [TaxId:11698]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q72497 (Start-85)
      • engineered (23)
    Domains in SCOPe 2.04: d3ds2b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ds2A (A:)
sptsildirqgpkepfrdyvdrfaktlraeqasqevknwmtetllvqnanpdcktilkal
gpgatleemmtacqgvggpghkarvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3ds2A (A:)
tsildirqgpkepfrdyvdrfaktlraeqasqevknwmtetllvqnanpdcktilkalgp
gatleemmtacqgvggpghkarvl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ds2B (B:)
sptsildirqgpkepfrdyvdrfaktlraeqasqevknwmtetllvqnanpdcktilkal
gpgatleemmtacqgvggpghkarvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3ds2B (B:)
tsildirqgpkepfrdyvdrfaktlraeqasqevknwmtetllvqnanpdcktilkalgp
gatleemmtacqgvggpghkarvl