PDB entry 3a5w

View 3a5w on RCSB PDB site
Description: Peroxiredoxin (wild type) from Aeropyrum pernix K1 (reduced form)
Class: oxidoreductase
Keywords: peroxiredoxin, thioredoxin peroxidase, Antioxidant, Oxidoreductase, Redox-active center
Deposited on 2009-08-12, released 2009-10-27
The last revision prior to the SCOPe 2.02 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.212
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wa_
  • Chain 'B':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wb_
  • Chain 'C':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wc_
  • Chain 'D':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wd_
  • Chain 'E':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5we_
  • Chain 'F':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wf_
  • Chain 'G':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wg_
  • Chain 'H':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wh_
  • Chain 'I':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wi_
  • Chain 'J':
    Compound: Probable peroxiredoxin
    Species: Aeropyrum pernix [TaxId:272557]
    Gene: APE_2278
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3a5wj_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3a5wA (A:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wA (A:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhatht
vrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneiigeg
livpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakllyee
a

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3a5wB (B:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wB (B:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeea

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3a5wC (C:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wC (C:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeea

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3a5wD (D:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wD (D:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeea

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3a5wE (E:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wE (E:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaath
tvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneiige
glivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakllye
ea

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3a5wF (F:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wF (F:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeea

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3a5wG (G:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wG (G:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaath
tvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneiige
glivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakllye
ea

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3a5wH (H:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wH (H:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yee

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >3a5wI (I:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wI (I:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeea

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >3a5wJ (J:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaesa
thtvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneii
geglivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakll
yeearthlh

    Sequence, based on observed residues (ATOM records): (download) 
    >3a5wJ (J:)
pgsipligerfpemevttdhgviklpdhyvsqgkwfvlfshpadftpvcttefvsfarry
edfqrlgvdliglsvdsvfshikwkewierhigvripfpiiadpqgtvarrlgllhaath
tvrgvfivdargvirtmlyypmelgrlvdeilrivkalklgdslkravpadwpnneiige
glivpppttedqararmesgqyrcldwwfcwdtpasrddveearrylrraaekpakllye
e