PDB entry 2voa

View 2voa on RCSB PDB site
Description: structure of an ap endonuclease from archaeoglobus fulgidus
Class: lyase
Keywords: exoiii, ap endonuclease, archaeoglobus fulgidus, lyase
Deposited on 2008-02-11, released 2008-12-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-01-20, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.198
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: exodeoxyribonuclease III
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O29675 (0-256)
      • engineered mutation (216)
    Domains in SCOPe 2.07: d2voaa_
  • Chain 'B':
    Compound: exodeoxyribonuclease III
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O29675 (0-256)
      • engineered mutation (216)
    Domains in SCOPe 2.07: d2voab_
  • Chain 'C':
    Compound: 5'-d(*gp*cp*gp*gp*tp*ap*gp*cp*cp*gp)-3'
  • Chain 'D':
    Compound: 5'-d(*cp*gp*gp*cp*tp*ap*cp*cp*gp*cp)-3'
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2voaA (A:)
mlkiatfnvnsirsrlhivipwlkenkpdilcmqetkvenrkfpeadfhrigyhvvfsgs
kgrngvaiasleepedvsfgldsepkdedrlirakiagidvintyvpqgfkidsekyqyk
lqwlerlyhylqktvdfrsfavwcgdmnvapepidvhspdklknhvcfhedarraykkil
elgfvdvlrkihpneriytfydyrvkgaierglgwrgdailatpplaercvdcyadikpr
laekpsdhlplvavfdv

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2voaB (B:)
mlkiatfnvnsirsrlhivipwlkenkpdilcmqetkvenrkfpeadfhrigyhvvfsgs
kgrngvaiasleepedvsfgldsepkdedrlirakiagidvintyvpqgfkidsekyqyk
lqwlerlyhylqktvdfrsfavwcgdmnvapepidvhspdklknhvcfhedarraykkil
elgfvdvlrkihpneriytfydyrvkgaierglgwrgdailatpplaercvdcyadikpr
laekpsdhlplvavfdv

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.