PDB entry 2qqm

View 2qqm on RCSB PDB site
Description: Crystal Structure of the a2b1b2 Domains from Human Neuropilin-1
Class: signaling protein
Keywords: VEGF receptor, semaphorin receptor, calcium-binding domain, Angiogenesis, Developmental protein, Differentiation, Glycoprotein, Heparan sulfate, Membrane, Neurogenesis, Proteoglycan, Secreted, Transmembrane, HORMONE, SIGNALING PROTEIN
Deposited on 2007-07-26, released 2007-11-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neuropilin-1
    Species: Homo sapiens [TaxId:9606]
    Gene: NRP1, NRP, VEGF165R
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2qqma1, d2qqma2, d2qqma3
  • Heterogens: CA, EDO, NAG, FUC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2qqmA (A:)
gshmfkrgpecsqnyttpsgvikspgfpekypnslectyivfapkmseiilefesfdlep
dsnppggmfcrydrleiwdgfpdvgphigrycgqktpgrirsssgilsmvfytdsaiake
gfsanysvlqssvsedfkcmealgmesgeihsdqitassqystnwsaersrlnypengwt
pgedsyrewiqvdlgllrfvtavgtqgaisketkkkyyvktykidvssngedwitikegn
kpvlfqgntnptdvvvavfpkplitrfvrikpatwetgismrfevygckitdypcsgmlg
mvsglisdsqitssnqgdrnwmpenirlvtsrsgwalppaphsyinewlqidlgeekivr
giiiqggkhrenkvfmrkfkigysnngsdwkmimddskrkaksfegnnnydtpelrtfpa
lstrfiriyperathgglglrmellgceve

    Sequence, based on observed residues (ATOM records): (download) 
    >2qqmA (A:)
pecsqnyttpsgvikspgfpekypnslectyivfapkmseiilefesfdlepdggmfcry
drleiwdgfpdvgphigrycgqktpgrirsssgilsmvfytdsaiakegfsanysvlqss
vsfkcmealgmesgeihsdqitassqystnwsaersrlnypengwtpgedsyrewiqvdl
gllrfvtavgtqgaisketkkkyyvktykidvssngedwitikegnkpvlfqgntnptdv
vvavfpkplitrfvrikpatwetgismrfevygckitdypcsgmlgmvsglisdsqitss
nqgdrnwmpenirlvtsrsgwalppaphsyinewlqidlgeekivrgiiiqggkhrenkv
fmrkfkigysnngsdwkmimddskrkaksfegnnnydtpelrtfpalstrfiriyperat
hgglglrmellgceve