PDB entry 2ox4

View 2ox4 on RCSB PDB site
Description: Crystal structure of putative dehydratase from Zymomonas mobilis ZM4
Class: isomerase
Keywords: ENOLASE, DEHYDRATASE, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, NYSGRC, NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, New York SGX Research Center for Structural Genomics, NYSGXRC, ISOMERASE
Deposited on 2007-02-19, released 2007-03-06
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.145
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.03: d2ox4a1, d2ox4a2
  • Chain 'B':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.03: d2ox4b1, d2ox4b2
  • Chain 'C':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
      • expression tag (396-399)
    Domains in SCOPe 2.03: d2ox4c1, d2ox4c2
  • Chain 'D':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
      • expression tag (396-399)
    Domains in SCOPe 2.03: d2ox4d1, d2ox4d2
  • Chain 'E':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.03: d2ox4e1, d2ox4e2
  • Chain 'F':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.03: d2ox4f1, d2ox4f2
  • Chain 'G':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.03: d2ox4g1, d2ox4g2
  • Chain 'H':
    Compound: Putative mandelate racemase
    Species: Zymomonas mobilis [TaxId:542]
    Gene: rspA, ZMO1264
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5NN22 (3-End)
      • expression tag (1-2)
    Domains in SCOPe 2.03: d2ox4h1, d2ox4h2
  • Heterogens: MG, CL, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2ox4A (A:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4A (A:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsiea
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2ox4B (B:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4B (B:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsiea
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2ox4C (C:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4C (C:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsieaghhh
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2ox4D (D:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4D (D:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsieaghhh
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2ox4E (E:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4E (E:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsiea
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2ox4F (F:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4F (F:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsiea
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2ox4G (G:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4G (G:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsiea
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2ox4H (H:)
    mslkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaa
    lligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllgg
    knredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsreg
    vflegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffy
    eeintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftef
    kkiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhny
    qpvkgrykvpelpgigqditeklyqisdyvsieaseghhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2ox4H (H:)
    slkitkieifhvhtrpqsgqrpilvkvstdegiyglgeagiaygvggsaaagilkdyaal
    ligedpfnteaiweklfkktfwgqgggtvifsgisafdiafwdikgkalnlpvykllggk
    nredlrvyasqlqfgwgkerkskgrkeeyaeealkavaegydavkvdvlahdrngsregv
    flegplpsetikigverveairnavgpdvdiivenhghtdlvsaiqfakaieefniffye
    eintplnprllkeakkkidiplasgeriysrwgflpfledrsidviqpdlgtcggftefk
    kiadmahifevtvqahvagtgvaeaaslhaeiaipnfcihehhqktllpeyeelcvhnyq
    pvkgrykvpelpgigqditeklyqisdyvsiea