PDB entry 2gtd

View 2gtd on RCSB PDB site
Description: Crystal Structure of a Type III Pantothenate Kinase: Insight into the Catalysis of an Essential Coenzyme A Biosynthetic Enzyme Universally Distributed in Bacteria
Class: transferase
Keywords: Type III Pantothenate Kinase, TRANSFERASE
Deposited on 2006-04-27, released 2006-08-01
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.188
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Type III pantothenate kinase
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (5-249)
      • initiating methionine (2)
      • cloning artifact (3-4)
    Domains in SCOPe 2.04: d2gtda1, d2gtda2
  • Chain 'B':
    Compound: Type III pantothenate kinase
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (5-249)
      • initiating methionine (2)
      • cloning artifact (3-4)
    Domains in SCOPe 2.04: d2gtdb1, d2gtdb2
  • Chain 'C':
    Compound: Type III pantothenate kinase
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (5-249)
      • initiating methionine (2)
      • cloning artifact (3-4)
    Domains in SCOPe 2.04: d2gtdc1, d2gtdc2
  • Chain 'D':
    Compound: Type III pantothenate kinase
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (5-249)
      • initiating methionine (2)
      • cloning artifact (3-4)
    Domains in SCOPe 2.04: d2gtdd1, d2gtdd2
  • Chain 'E':
    Compound: Type III pantothenate kinase
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (5-249)
      • initiating methionine (2)
      • cloning artifact (3-4)
    Domains in SCOPe 2.04: d2gtde1, d2gtde2
  • Chain 'F':
    Compound: Type III pantothenate kinase
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (5-249)
      • initiating methionine (2)
      • cloning artifact (3-4)
    Domains in SCOPe 2.04: d2gtdf1, d2gtdf2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gtdA (A:)
gamdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreik
gigvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvk
eygkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvv
gkdteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedlt
ikgvyhfcfgd

    Sequence, based on observed residues (ATOM records): (download) 
    >2gtdA (A:)
mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
gvyhfcfg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gtdB (B:)
gamdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreik
gigvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvk
eygkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvv
gkdteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedlt
ikgvyhfcfgd

    Sequence, based on observed residues (ATOM records): (download) 
    >2gtdB (B:)
mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
gvyhfcfg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2gtdC (C:)
gamdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreik
gigvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvk
eygkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvv
gkdteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedlt
ikgvyhfcfgd

    Sequence, based on observed residues (ATOM records): (download) 
    >2gtdC (C:)
mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
gvyhfcfg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2gtdD (D:)
gamdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreik
gigvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvk
eygkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvv
gkdteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedlt
ikgvyhfcfgd

    Sequence, based on observed residues (ATOM records): (download) 
    >2gtdD (D:)
mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
gvyhfcfg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2gtdE (E:)
gamdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreik
gigvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvk
eygkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvv
gkdteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedlt
ikgvyhfcfgd

    Sequence, based on observed residues (ATOM records): (download) 
    >2gtdE (E:)
mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
gvyhfcfg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2gtdF (F:)
gamdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreik
gigvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvk
eygkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvv
gkdteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedlt
ikgvyhfcfgd

    Sequence, based on observed residues (ATOM records): (download) 
    >2gtdF (F:)
mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
gvyhfcfg