SCOPe 2.04: Structural Classification of Proteins

PDB entry 2ex3

View 2ex3 on RCSB PDB site
Description: Bacteriophage phi29 DNA polymerase bound to terminal protein
Class: transferase/replication
Keywords: DNA POLYMERASE: PROTEIN PRIMER COMPLEX, transferase-replication COMPLEX
Deposited on 2005-11-07, released 2006-03-14
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.203
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: DNA polymerase
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 2
Database cross-references and differences (RAF-indexed):
- Uniprot P03680 (Start-574)
  - engineered (11)
  - engineered (65)
Domains in SCOPe 2.04: d2ex3a1, d2ex3a2
Chain 'B':
Compound: DNA terminal protein
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 3
Database cross-references and differences (RAF-indexed):
- Uniprot P03681 (34-End)
Domains in SCOPe 2.04: d2ex3b1
Chain 'C':
Compound: DNA polymerase
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 2
Database cross-references and differences (RAF-indexed):
- Uniprot P03680 (Start-574)
  - engineered (11)
  - engineered (65)
Domains in SCOPe 2.04: d2ex3c1, d2ex3c2
Chain 'D':
Compound: DNA terminal protein
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 3
Database cross-references and differences (RAF-indexed):
- Uniprot P03681 (34-End)
Domains in SCOPe 2.04: d2ex3d1
Chain 'E':
Compound: DNA polymerase
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 2
Database cross-references and differences (RAF-indexed):
- Uniprot P03680 (Start-574)
  - engineered (11)
  - engineered (65)
Domains in SCOPe 2.04: d2ex3e1, d2ex3e2
Chain 'F':
Compound: DNA terminal protein
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 3
Database cross-references and differences (RAF-indexed):
- Uniprot P03681 (34-End)
Domains in SCOPe 2.04: d2ex3f1
Chain 'G':
Compound: DNA polymerase
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 2
Database cross-references and differences (RAF-indexed):
- Uniprot P03680 (Start-574)
  - engineered (11)
  - engineered (65)
Domains in SCOPe 2.04: d2ex3g1, d2ex3g2
Chain 'H':
Compound: DNA terminal protein
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 3
Database cross-references and differences (RAF-indexed):
- Uniprot P03681 (34-End)
Domains in SCOPe 2.04: d2ex3h1
Chain 'I':
Compound: DNA polymerase
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 2
Database cross-references and differences (RAF-indexed):
- Uniprot P03680 (Start-574)
  - engineered (11)
  - engineered (65)
Domains in SCOPe 2.04: d2ex3i1, d2ex3i2
Chain 'J':
Compound: DNA terminal protein
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 3
Database cross-references and differences (RAF-indexed):
- Uniprot P03681 (34-End)
Domains in SCOPe 2.04: d2ex3j1
Chain 'K':
Compound: DNA polymerase
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 2
Database cross-references and differences (RAF-indexed):
- Uniprot P03680 (Start-574)
  - engineered (11)
  - engineered (65)
Domains in SCOPe 2.04: d2ex3k1, d2ex3k2
Chain 'L':
Compound: DNA terminal protein
Species: BACILLUS PHAGE PHI29 [TaxId:10756]
Gene: 3
Database cross-references and differences (RAF-indexed):
- Uniprot P03681 (34-End)
Domains in SCOPe 2.04: d2ex3l1
Heterogens: PB

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2ex3A (A:)
mkhmprkmyscafetttkvedcrvwaygymniedhseykignsldefmawvlkvqadlyf
hnlkfagafiinwlerngfkwsadglpntyntiisrmgqwymidiclgykgkrkihtviy
dslkklpfpvkkiakdfkltvlkgdidyhkerpvgykitpeeyayikndiqiiaealliq
fkqgldrmtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkek
eigegmvfdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyip
tiqikrsrfykgneylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglf
kdfidkwtyikttsegaikqlaklmlnslygkfasnpdvtgkvpylkengalgfrlgeee
tkdpvytpmgvfitawaryttitaaqacydriiycdtdsihltgteipdvikdivdpkkl
gywahestfkrakylrqktyiqdiymkevdgklvegspddytdikfsvkcagmtdkikke
vtfenfkvgfsrkmkpkpvqvpggvvlvddtftik