PDB entry 2e9z

View 2e9z on RCSB PDB site
Description: Foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, ATP and UTP
Class: transferase/RNA
Keywords: 3D polymerase, Foot-and- mouth disease virus, RNA-dependent RNA polymerase, polymerase, TRANSFERASE/RNA COMPLEX
Deposited on 2007-01-29, released 2007-06-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.239
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA-dependent RNA polymerase
    Species: Foot-and-mouth disease virus [TaxId:244367]
    Gene: 3D
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0QEE1 (0-469)
      • cloning artifact (470-475)
    Domains in SCOPe 2.07: d2e9za2, d2e9za3
  • Chain 'B':
    Compound: 5'-r(*cp*ap*up*gp*gp*gp*cp*cp*c)-3'
  • Chain 'C':
    Compound: 5'-r(*gp*gp*gp*cp*cp*cp*a)-3'
  • Heterogens: MG, UTP, PPV, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2e9zA (A:)
glivdtrdveervhvmrktklaptvahgvfnpefgpaalsnkdprlnegvvldevifskh
kgdtkmsaedkalfrrcaadyasrlhsvlgtanaplsiyeaikgvdgldamepdtapglp
walqgkrrgalidfengtvgpeveaalklmekreykfacqtflkdeirpmekvragktri
vdvlpvehilytrmmigrfcaqmhsnngpqigsavgcnpdvdwqrfgthfaqyrnvwdvd
ysafdanhcsdamnimfeevfrtefgfhpnaewilktlvntehayenkritveggmpsgc
satsiintilnniyvlyalrrhyegveldtytmisygddivvasdydldfealkphfksl
gqtitpadksdkgfvlghsitdvtflkrhfhmdygtgfykpvmasktleailsfarrgti
qeklisvaglavhsgpdeyrrlfepfqglfeipsyrslylrwvnavcgdaaalehh

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.