PDB entry 2d8l

View 2d8l on RCSB PDB site
Description: Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc
Class: hydrolase
Keywords: unsaturated rhamnogalacturonyl hydrolase
Deposited on 2005-12-06, released 2006-11-14
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.162
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative glycosyl hydrolase yteR
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2d8la_
  • Heterogens: UCD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2d8lA (A:)
mgsmdqsiavkspltyaealantimntytveelppanrwhyhqgvflcgvlrlweatgek
ryfeyakayadlliddngnllfrrdeldaiqaglilfplyeqtkderyvkaakrlrslyg
tlnrtseggfwhkdgypyqmwldglymggpfalkyanlkqetelfdqvvlqeslmrkhtk
daktglfyhawdeakkmpwaneetgcspefwarsigwyvmsladmieelpkkhpnrhvwk
ntlqdmiksicryqdketglwyqivdkgdrsdnwlessgsclymyaiakginkgyldray
ettllkayqgliqhktetsedgaflvkdicvgtsagfydyyvsrerstndlhgagafila
mteleplfrsagk

    Sequence, based on observed residues (ATOM records): (download) 
    >2d8lA (A:)
kspltyaealantimntytveelppanrwhyhqgvflcgvlrlweatgekryfeyakaya
dlliddngnllfrrdeldaiqaglilfplyeqtkderyvkaakrlrslygtlnrtseggf
whkdgypyqmwldglymggpfalkyanlkqetelfdqvvlqeslmrkhtkdaktglfyha
wdeakkmpwaneetgcspefwarsigwyvmsladmieelpkkhpnrhvwkntlqdmiksi
cryqdketglwyqivdkgdrsdnwlessgsclymyaiakginkgyldrayettllkayqg
liqhktetsedgaflvkdicvgtsagfydyyvsrerstndlhgagafilamteleplfrs
agk