PDB entry 1zr4

View 1zr4 on RCSB PDB site
Description: Structure of a Synaptic gamma-delta Resolvase Tetramer Covalently linked to two Cleaved DNAs
Class: recombination/DNA
Keywords: resolvase, site-specific, recombination, flat interface, cross-crystal averaging, multi-crystal averaging, RECOMBINATION-DNA COMPLEX
Deposited on 2005-05-19, released 2005-08-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 3.4 Å
R-factor: 0.266
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: transposon gamma-delta resolvase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03012 (0-182)
      • engineered (1)
      • engineered (55)
      • engineered (100-102)
      • engineered (123)
    Domains in SCOPe 2.08: d1zr4a1, d1zr4a2
  • Chain 'B':
    Compound: transposon gamma-delta resolvase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03012 (Start-182)
      • engineered (1)
      • engineered (55)
      • engineered (100-102)
      • engineered (123)
    Domains in SCOPe 2.08: d1zr4b1, d1zr4b2
  • Chain 'D':
    Compound: transposon gamma-delta resolvase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03012 (Start-182)
      • engineered (1)
      • engineered (55)
      • engineered (100-102)
      • engineered (123)
    Domains in SCOPe 2.08: d1zr4d1, d1zr4d2
  • Chain 'E':
    Compound: transposon gamma-delta resolvase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03012 (0-182)
      • engineered (1)
      • engineered (55)
      • engineered (100-102)
      • engineered (123)
    Domains in SCOPe 2.08: d1zr4e1, d1zr4e2
  • Chain 'I':
    Compound: aaa
    Species: synthetic, synthetic
  • Chain 'J':
    Compound: tcagtgtccgataatttat
    Species: synthetic, synthetic
  • Chain 'K':
    Compound: ttatcggacactg
    Species: synthetic, synthetic
  • Chain 'M':
    Compound: tcagtgtccgataatttat
    Species: synthetic, synthetic
  • Chain 'N':
    Compound: ttatcggacactg
    Species: synthetic, synthetic
  • Chain 'O':
    Compound: aaa
    Species: synthetic, synthetic
  • Chain 'U':
    Compound: tcagtgtccgataatttat
    Species: synthetic, synthetic
  • Chain 'V':
    Compound: ttatcggacactg
    Species: synthetic, synthetic
  • Chain 'W':
    Compound: aaa
    Species: synthetic, synthetic
  • Chain 'X':
    Compound: tcagtgtccgataatttat
    Species: synthetic, synthetic
  • Chain 'Y':
    Compound: ttatcggacactg
    Species: synthetic, synthetic
  • Chain 'Z':
    Compound: aaa
    Species: synthetic, synthetic

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zr4A (A:)
malfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdv
ilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerq
rilqrtnegrqeamakgvvfgrkrkidrdavlnmwqqglgashisktmniarstvykvin
esn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1zr4B (B:)
malfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdv
ilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerq
rilqrtnegrqeamakgvvfgrkrkidrdavlnmwqqglgashisktmniarstvykvin
esn

    Sequence, based on observed residues (ATOM records): (download) 
    >1zr4B (B:)
alfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdvi
lvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerqr
ilqrtnegrqeamakgvvfgrkrkidrdavlnmwqqglgashisktmniarstvykvine
sn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1zr4D (D:)
malfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdv
ilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerq
rilqrtnegrqeamakgvvfgrkrkidrdavlnmwqqglgashisktmniarstvykvin
esn

    Sequence, based on observed residues (ATOM records): (download) 
    >1zr4D (D:)
alfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdvi
lvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerqr
ilqrtnegrqeamakgvvfgrkrkidrdavlnmwqqglgashisktmniarstvykvine
sn

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zr4E (E:)
malfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdv
ilvkkldrlgrdtadmiqlikefdaqgvsirfiddgistdsyigkmvvtilsavaqaerq
rilqrtnegrqeamakgvvfgrkrkidrdavlnmwqqglgashisktmniarstvykvin
esn

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    No sequence available.

  • Chain 'O':
    No sequence available.

  • Chain 'U':
    No sequence available.

  • Chain 'V':
    No sequence available.

  • Chain 'W':
    No sequence available.

  • Chain 'X':
    No sequence available.

  • Chain 'Y':
    No sequence available.

  • Chain 'Z':
    No sequence available.