PDB entry 1zh5
View 1zh5 on RCSB PDB site
Description: Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen
Class: transcription/RNA
Keywords: TRANSCRIPTION/RNA, TRANSCRIPTION-RNA complex
Deposited on
2005-04-22, released
2006-01-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.203
AEROSPACI score: 0.5
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Lupus La protein
Species: Homo sapiens [TaxId:9606]
Gene: ssb
Database cross-references and differences (RAF-indexed):
- Uniprot P05455
- modified residue (10)
- modified residue (52)
- modified residue (80)
- modified residue (142)
Domains in SCOPe 2.08: d1zh5a1, d1zh5a2 - Chain 'B':
Compound: Lupus La protein
Species: Homo sapiens [TaxId:9606]
Gene: ssb
Database cross-references and differences (RAF-indexed):
- Uniprot P05455
- modified residue (10)
- modified residue (52)
- modified residue (80)
- modified residue (142)
Domains in SCOPe 2.08: d1zh5b1, d1zh5b2 - Chain 'C':
Compound: 5'-r(*up*gp*cp*up*gp*up*up*up*u)-3'
- Chain 'D':
Compound: 5'-r(*up*gp*cp*up*gp*up*up*up*u)-3'
- Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1zh5A (A:)
smaengdnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrln
rlttdfnvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfp
tdatlddikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketd
llilfkddyfakkne
Sequence, based on observed residues (ATOM records): (download)
>1zh5A (A:)
gdnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrlttd
fnvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptdatl
ddikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdllilf
kddyf
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1zh5B (B:)
smaengdnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrln
rlttdfnvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfp
tdatlddikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketd
llilfkddyfakkne
Sequence, based on observed residues (ATOM records): (download)
>1zh5B (B:)
dnekmaaleakichqieyyfgdfnlprdkflkeqikldegwvpleimikfnrlnrlttdf
nvivealskskaelmeisedktkirrspskplpevtdeykndvknrsvyikgfptdatld
dikewledkgqvlniqmrrtlhkafkgsifvvfdsiesakkfvetpgqkyketdllilfk
ddyf
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.