PDB entry 1zgo

View 1zgo on RCSB PDB site
Description: High Resolution Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed)
Class: luminescent protein
Keywords: RFP, red, fluorescent protein, DsRed, drFP583, chromophore, GFP, coral, beta barrel, beta can, LUMINESCENT PROTEIN
Deposited on 2005-04-21, released 2005-08-02
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-06-30, with a file datestamp of 2009-06-26.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.163
AEROSPACI score: 0.68 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.04: d1zgoa_
  • Chain 'B':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.04: d1zgob_
  • Chain 'C':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.04: d1zgoc_
  • Chain 'D':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.04: d1zgod_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1zgoA (A:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfqygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgoA (A:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
qygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1zgoB (B:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfqygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgoB (B:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
qygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1zgoC (C:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfqygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgoC (C:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
qygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1zgoD (D:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfqygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgoD (D:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
qygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl