PDB entry 1yje
View 1yje on RCSB PDB site
Description: Crystal structure of the rNGFI-B ligand-binding domain
Class: transcription
Keywords: NGFI-B, Nur77, Nuclear receptor, ligand-binding domain, novel coregulator interface, cell-specific, Structural Proteomics in Europe, SPINE, Structural Genomics, TRANSCRIPTION
Deposited on
2005-01-14, released
2005-02-22
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.246
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Orphan nuclear receptor NR4A1
Species: Rattus norvegicus [TaxId:10116]
Gene: Nr4a1, Hmr, Ngfib
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1yjea_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yjeA (A:)
gsshhhhhhssglvprgshmqppdasptnlltslirahldsgpntakldyskfqelvlpr
fgkedagdvqqfydllsgsldvirkwaekipgfielspgdqdlllesaflelfilrlayr
skpgegklifcsglvlhrlqcargfgdwidnilafsrslhslgvdvpafaclsalvlitd
rhglqdprrveelqnriasclkehmaavagdpqpasclsrllgklpelrtlctqglqrif
clkledlvppppivdkifmdtlsf
Sequence, based on observed residues (ATOM records): (download)
>1yjeA (A:)
nlltslirahldsgpntakldyskfqelvlprfgkedagdvqqfydllsgsldvirkwae
kipgfielspgdqdlllesaflelfilrlayrskpgegklifcsglvlhrlqcargfgdw
idnilafsrslhslgvdvpafaclsalvlitdrhglqdprrveelqnriasclkehmaav
sclsrllgklpelrtlctqglqrifclkledlvppppivdkifmdt