SCOPe 2.06: Domain d1yjea_: 1yje A:

Lineage for d1yjea_ (1yje A:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [187147] (4 PDB entries)

8. Domain d1yjea_: 1yje A: [203200]
   automated match to d3v3ea_

Details for d1yjea_

PDB Entry: 1yje, 2.4 Å

PDB Description: crystal structure of the rngfi-b ligand-binding domain

PDB Compounds: (A:) Orphan nuclear receptor NR4A1

SCOPe Domain Sequences for d1yjea_:

Sequence, based on SEQRES records:

>d1yjea_ a.123.1.1 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
nlltslirahldsgpntakldyskfqelvlprfgkedagdvqqfydllsgsldvirkwae
kipgfielspgdqdlllesaflelfilrlayrskpgegklifcsglvlhrlqcargfgdw
idnilafsrslhslgvdvpafaclsalvlitdrhglqdprrveelqnriasclkehmaav
agdpqpasclsrllgklpelrtlctqglqrifclkledlvppppivdkifmdt

Sequence, based on observed residues (ATOM records):

>d1yjea_ a.123.1.1 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
nlltslirahldsgpntakldyskfqelvlprfgkedagdvqqfydllsgsldvirkwae
kipgfielspgdqdlllesaflelfilrlayrskpgegklifcsglvlhrlqcargfgdw
idnilafsrslhslgvdvpafaclsalvlitdrhglqdprrveelqnriasclkehmaav
sclsrllgklpelrtlctqglqrifclkledlvppppivdkifmdt

Timeline for d1yjea_:

• d1yjea_ first appeared in SCOPe 2.03
  
• d1yjea_ appears in SCOPe 2.05
  
• d1yjea_ appears in SCOPe 2.07
  
• d1yjea_ appears in the current release, SCOPe 2.08