PDB entry 1xm5

View 1xm5 on RCSB PDB site
Description: Crystal structure of metal-dependent hydrolase ybeY from E. coli, Pfam UPF0054
Class: structural genomics, unknown function
Keywords: Structural genomics, protein structure initiative, NYSGXRC target T842, PFAM family UPF0054, PSI, New York SGX Research Center for Structural Genomics, UNKNOWN FUNCTION
Deposited on 2004-10-01, released 2004-10-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-03, with a file datestamp of 2021-01-29.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical UPF0054 protein ybeY
    Species: Escherichia coli [TaxId:562]
    Gene: ybeY
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xm5a_
  • Chain 'B':
    Compound: Hypothetical UPF0054 protein ybeY
    Species: Escherichia coli [TaxId:562]
    Gene: ybeY
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xm5b_
  • Chain 'C':
    Compound: Hypothetical UPF0054 protein ybeY
    Species: Escherichia coli [TaxId:562]
    Gene: ybeY
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xm5c_
  • Chain 'D':
    Compound: Hypothetical UPF0054 protein ybeY
    Species: Escherichia coli [TaxId:562]
    Gene: ybeY
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1xm5d_
  • Heterogens: NI

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1xm5A (A:)
msqvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrg
kdkptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhll
gydhieddeaeemealeteimlalgyedpyiaeke

    Sequence, based on observed residues (ATOM records): (download) 
    >1xm5A (A:)
msqvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrg
kdkptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhll
gydhieddeaeemealeteimlalgyedpyia

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1xm5B (B:)
msqvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrg
kdkptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhll
gydhieddeaeemealeteimlalgyedpyiaeke

    Sequence, based on observed residues (ATOM records): (download) 
    >1xm5B (B:)
msqvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrg
kdkptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhll
gydhieddeaeemealeteimlalgyedpyia

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1xm5C (C:)
msqvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrg
kdkptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhll
gydhieddeaeemealeteimlalgyedpyiaeke

    Sequence, based on observed residues (ATOM records): (download) 
    >1xm5C (C:)
qvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrgkd
kptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhllgy
dhieddeaeemealeteimlalgyedpy

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1xm5D (D:)
msqvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrg
kdkptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhll
gydhieddeaeemealeteimlalgyedpyiaeke

    Sequence, based on observed residues (ATOM records): (download) 
    >1xm5D (D:)
msqvildlqlacednsglpeesqfqtwlnavipqfqeesevtirvvdtaeshslnltyrg
kdkptnvlsfpfevppgmemsllgdlvicrqvvekeaqeqgkpleahwahmvvhgslhll
gydhieddeaeemealeteimlalgyedpyia