PDB entry 1ser

View 1ser on RCSB PDB site
Description: the 2.9 angstroms crystal structure of t. thermophilus seryl-tRNA synthetase complexed with tRNA ser
Class: ligase/RNA
Keywords: protein-t-RNA complex, ligase-RNA complex
Deposited on 1994-02-21, released 1994-04-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-29, with a file datestamp of 2017-11-24.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (seryl-tRNA synthetase (e.c.6.1.1.11))
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P34945
      • conflict (207)
    Domains in SCOPe 2.08: d1sera1, d1sera2
  • Chain 'B':
    Compound: protein (seryl-tRNA synthetase (e.c.6.1.1.11))
    Species: Thermus thermophilus [TaxId:274]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P34945 (0-420)
      • conflict (207)
    Domains in SCOPe 2.08: d1serb1, d1serb2
  • Chain 'T':
    Compound: trnaser
    Species: Thermus thermophilus [TaxId:274]
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1serA (A:)
mvdlkrlrqepevfhrairekgvaldleallaldrevqelkkrlqevqternqvakrvpk
appeekealiargkalgeeakrleealrekearlealllqvplppwpgapvggeeanrei
krvggppefsfppldhvalmekngwweprisqvsgsrsyalkgdlalyelallrfamdfm
arrgflpmtlpsyarekaflgtghfpayrdqvwaiaetdlyltgtaevvlnalhsgeilp
yealplryagyapafrseagsfgkdvrglmrvhqfhkveqyvlteasleasdrafqelle
naeeilrllelpyrlvevatgdmgpgkwrqvdievylpsegryrethscsalldwqarra
nlryrdpegrvryaytlnntalatprilamllenhqlqdgrvrvpqalipymgkevlepc
g

    Sequence, based on observed residues (ATOM records): (download) 
    >1serA (A:)
mvdlkrlrqepevfhrairekgvaldleallaldrevqrekearlealllqvplppwpga
pvggeeanreikrvggppefsfppldhvalmekngwweprisqvsgsrsyalkgdlalye
lallrfamdfmarrgflpmtlpsyarekaflgtghfpayrdqvwaiaetdlyltgtaevv
lnalhsgeilpyealplryagyapafrseagsfgkdvrglmrvhqfhkveqyvlteasle
asdrafqellenaeeilrllelpyrlvevatgdmgpgkwrqvdievylpsegryrethsc
salldwqarranlryrdpegrvryaytlnntalatprilamllenhqlqdgrvrvpqali
pymgkevlepcg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1serB (B:)
mvdlkrlrqepevfhrairekgvaldleallaldrevqelkkrlqevqternqvakrvpk
appeekealiargkalgeeakrleealrekearlealllqvplppwpgapvggeeanrei
krvggppefsfppldhvalmekngwweprisqvsgsrsyalkgdlalyelallrfamdfm
arrgflpmtlpsyarekaflgtghfpayrdqvwaiaetdlyltgtaevvlnalhsgeilp
yealplryagyapafrseagsfgkdvrglmrvhqfhkveqyvlteasleasdrafqelle
naeeilrllelpyrlvevatgdmgpgkwrqvdievylpsegryrethscsalldwqarra
nlryrdpegrvryaytlnntalatprilamllenhqlqdgrvrvpqalipymgkevlepc
g

  • Chain 'T':
    No sequence available.