PDB entry 1h15
View 1h15 on RCSB PDB site
Description: X-ray crystal structure of HLA-DRA1*0101/DRB5*0101 complexed with a peptide from Epstein Barr Virus DNA polymerase
Class: immune system/transferase
Keywords: IMMUNE SYSTEM/TRANSFERASE, COMPLEX (MHC-ANTIGEN), IMMUNE SYSTEM, MHC, HLA, CLASS II, DR2, DRB5, EBV, DNA POLYMERASE, DNA-DIRECTED DNA POLYMERASE, IMMUNE SYSTEM-TRANSFERASE complex
Deposited on
2002-07-02, released
2002-10-03
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hla class II histocompatibility antigen, dr alpha chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1h15a1, d1h15a2 - Chain 'B':
Compound: hla class II histocompatibility antigen, dr beta 1 chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1h15b1, d1h15b2 - Chain 'C':
Compound: DNA polymerase
Species: HUMAN HERPESVIRUS 4, synthetic [TaxId:10376]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: hla class II histocompatibility antigen, dr alpha chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1h15d1, d1h15d2 - Chain 'E':
Compound: hla class II histocompatibility antigen, dr beta 1 chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1h15e1, d1h15e2 - Chain 'F':
Compound: DNA polymerase
Species: HUMAN HERPESVIRUS 4, synthetic [TaxId:10376]
Database cross-references and differences (RAF-indexed):
- Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1h15A (A:)
ikeehviiqaefylnpdqsgefmfdfdgdeifhvdmakketvwrleefgrfasfeaqgal
aniavdkanleimtkrsnytpitnvppevtvltnspvelrepnvlicfidkftppvvnvt
wlrngkpvttgvsetvflpredhlfrkfhylpflpstedvydcrvehwgldepllkhwef
da
Sequence, based on observed residues (ATOM records): (download)
>1h15A (A:)
eehviiqaefylnpdqsgefmfdfdgdeifhvdmakketvwrleefgrfasfeaqgalan
iavdkanleimtkrsnytpitnvppevtvltnspvelrepnvlicfidkftppvvnvtwl
rngkpvttgvsetvflpredhlfrkfhylpflpstedvydcrvehwgldepllkhwefda
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1h15B (B:)
gdtrprflqqdkyechffngtervrflhrdiynqeedlrfdsdvgeyravtelgrpdaey
wnsqkdfledrraavdtycrhnygvgesftvqrrvepkvtvypartqtlqhhnllvcsvn
gfypgsievrwfrnsqeekagvvstgliqngdwtfqtlvmletvprsgevytcqvehpsv
tspltvewra
Sequence, based on observed residues (ATOM records): (download)
>1h15B (B:)
dtrprflqqdkyechffngtervrflhrdiynqeedlrfdsdvgeyravtelgrpdaeyw
nsqkdfledrraavdtycrhnygvgesftvqrrvepkvtvypartqtlqhhnllvcsvng
fypgsievrwfrnsqeekagvvstgliqngdwtfqtlvmletvprsgevytcqvehpsvt
spltvewra
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1h15D (D:)
ikeehviiqaefylnpdqsgefmfdfdgdeifhvdmakketvwrleefgrfasfeaqgal
aniavdkanleimtkrsnytpitnvppevtvltnspvelrepnvlicfidkftppvvnvt
wlrngkpvttgvsetvflpredhlfrkfhylpflpstedvydcrvehwgldepllkhwef
da
Sequence, based on observed residues (ATOM records): (download)
>1h15D (D:)
eehviiqaefylnpdqsgefmfdfdgdeifhvdmakketvwrleefgrfasfeaqgalan
iavdkanleimtkrsnytpitnvppevtvltnspvelrepnvlicfidkftppvvnvtwl
rngkpvttgvsetvflpredhlfrkfhylpflpstedvydcrvehwgldepllkhwefda
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1h15E (E:)
gdtrprflqqdkyechffngtervrflhrdiynqeedlrfdsdvgeyravtelgrpdaey
wnsqkdfledrraavdtycrhnygvgesftvqrrvepkvtvypartqtlqhhnllvcsvn
gfypgsievrwfrnsqeekagvvstgliqngdwtfqtlvmletvprsgevytcqvehpsv
tspltvewra
Sequence, based on observed residues (ATOM records): (download)
>1h15E (E:)
dtrprflqqdkyechffngtervrflhrdiynqeedlrfdsdvgeyravtelgrpdaeyw
nsqkdfledrraavdtycrhnygvgesftvqrrvepkvtvypartqtlqhhnllvcsvng
fypgsievrwfrnsqeekagvvstgliqngdwtfqtlvmletvprsgevytcqvehpsvt
spltvewra
- Chain 'F':
No sequence available.