PDB entry 1fok

View 1fok on RCSB PDB site
Description: structure of restriction endonuclease foki bound to DNA
Class: hydrolase/DNA
Keywords: complex (endonuclease/DNA), type iis, restriction endonuclease, deoxyribonuclease, DNA hydrolysis, DNA cleavage, hydrolase/DNA complex
Deposited on 1997-04-18, released 1997-12-03
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.214
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein (foki restriction endonucleas)
    Species: Planomicrobium okeanokoites [TaxId:244]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1foka1, d1foka2, d1foka3, d1foka4
  • Chain 'B':
    Compound: DNA (5'-d(*tp*cp*gp*gp*ap*tp*gp*ap*tp*ap*ap*cp*gp*cp*tp*ap*g p*tp*cp*a)-3')
    Species: Planomicrobium okeanokoites [TaxId:244]
    Gene: FOKI
  • Chain 'C':
    Compound: DNA (5'-d(*ap*tp*gp*ap*cp*tp*ap*gp*cp*gp*tp*tp*ap*tp*cp*ap*t p*cp*cp*g)-3')
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1fokA (A:)
kirtfgwvqnpgkfenlkrvvqvfdrnskvhnevknikiptlvkeskiqkelvaimnqhd
liytykelvgtgtsirseapcdaiiqatiadqgnkkgyidnwssdgflrwahalgfieyi
nksdsfvitdvglaysksadgsaiekeilieaissyppairiltlledgqhltkfdlgkn
lgfsgesgftslpegilldtlanampkdkgeirnnwegssdkyarmiggwldklglvkqg
kkefiiptlgkpdnkefishafkitgeglkvlrrakgstkftrvpkrvywemlatnltdk
eyvrtrralileilikagslkieqiqdnlkklgfdevietiendikglintgifieikgr
fyqlkdhilqfvipnrgvtkqlvkseleekkselrhklkyvpheyielieiarnstqdri
lemkvmeffmkvygyrgkhlggsrkpdgaiytvgspidygvivdtkaysggynlpigqad
emqryveenqtrnkhinpnewwkvypssvtefkflfvsghfkgnykaqltrlnhitncng
avlsveelliggemikagtltleevrrkfnngeinf

    Sequence, based on observed residues (ATOM records): (download) 
    >1fokA (A:)
kirtfgwvqnpgkfenlkrvvqvfdrnskvhnevknikiptlvkeskiqkelvaimnqhd
liytykelvgtgtsirseapcdaiiqatiadqgnkkgyidnwssdgflrwahalgfieyi
nksdsfvitdvglaysksadgsaiekeilieaissyppairiltlledgqhltkfdlgkn
lgfsgesgftslpegilldtlanampkdkgeirnnwegssdkyarmiggwldklglvkqg
kkefiiptpdnkefishafkitgeglkvlrrakgsvpkrvywemlatnltdkeyvrtrra
lileilikagslkieqiqdnlkklgfdevietiendikglintgifieikgrfyqlkdhi
lqfvipnrgvtkqlvkseleekkselrhklkyvpheyielieiarnstqdrilemkvmef
fmkvygyrgkhlggsrkpdgaiytvgspidygvivdtkaysggynlpigqademqryvee
nqtrnkhinpnewwkvypssvtefkflfvsghfkgnykaqltrlnhitncngavlsveel
liggemikagtltleevrrkfnngeinf

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.