PDB entry 1fiu

View 1fiu on RCSB PDB site
Description: tetrameric restriction endonuclease ngomiv in complex with cleaved DNA
Class: hydrolase/DNA
Keywords: PROTEIN-DNA COMPLEX, DOUBLE HELIX, RESTRICTION ENDONUCLEASE, RESTRICTION-MODIFICTION SYSTEMS, HYDROLASE, PHOSPHODIESTERASE, METAL ION, COMPLEX (ENDONUCLEASE/DNA), hydrolase/DNA COMPLEX
Deposited on 2000-08-07, released 2001-02-07
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.173
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: type II restriction enzyme ngomi
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31032 (0-285)
      • conflict (1)
    Domains in SCOPe 2.04: d1fiua_
  • Chain 'B':
    Compound: type II restriction enzyme ngomi
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31032 (0-285)
      • conflict (1)
    Domains in SCOPe 2.04: d1fiub_
  • Chain 'C':
    Compound: type II restriction enzyme ngomi
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31032 (0-285)
      • conflict (1)
    Domains in SCOPe 2.04: d1fiuc_
  • Chain 'D':
    Compound: type II restriction enzyme ngomi
    Species: NEISSERIA GONORRHOEAE [TaxId:485]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31032 (0-285)
      • conflict (1)
    Domains in SCOPe 2.04: d1fiud_
  • Chain 'E':
    Compound: DNA (5'-d(*tp*gp*cp*g)-3')
  • Chain 'F':
    Compound: DNA (5'-d(*tp*gp*cp*g)-3')
  • Chain 'G':
    Compound: DNA (5'-d(*tp*gp*cp*g)-3')
  • Chain 'H':
    Compound: DNA (5'-d(*tp*gp*cp*g)-3')
  • Chain 'I':
    Compound: DNA (5'-d(p*cp*cp*gp*gp*cp*gp*c)-3')
  • Chain 'J':
    Compound: DNA (5'-d(p*cp*cp*gp*gp*cp*gp*c)-3')
  • Chain 'K':
    Compound: DNA (5'-d(p*cp*cp*gp*gp*cp*gp*c)-3')
  • Chain 'L':
    Compound: DNA (5'-d(p*cp*cp*gp*gp*cp*gp*c)-3')
  • Heterogens: MG, ACY, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1fiuA (A:)
mqplftqerrifhkklldgnilatnnrgvvsnadgsntrsfniakgiadllhsetvserl
pgqtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalaka
aeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpll
hasisckwtirsdraqnarseglnlvrnrkgrlphivvvtaeptpsrissialgtgeidc
vyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1fiuB (B:)
mqplftqerrifhkklldgnilatnnrgvvsnadgsntrsfniakgiadllhsetvserl
pgqtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalaka
aeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpll
hasisckwtirsdraqnarseglnlvrnrkgrlphivvvtaeptpsrissialgtgeidc
vyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1fiuC (C:)
mqplftqerrifhkklldgnilatnnrgvvsnadgsntrsfniakgiadllhsetvserl
pgqtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalaka
aeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpll
hasisckwtirsdraqnarseglnlvrnrkgrlphivvvtaeptpsrissialgtgeidc
vyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1fiuD (D:)
mqplftqerrifhkklldgnilatnnrgvvsnadgsntrsfniakgiadllhsetvserl
pgqtsgnafeaicsefvqsafeklqhirpgdwnvkqvgsrnrleiaryqqyahltalaka
aeenpelaaalgsdytitpdiivtrnliadaeinrneflvdeniatyaslragngnmpll
hasisckwtirsdraqnarseglnlvrnrkgrlphivvvtaeptpsrissialgtgeidc
vyhfalyeleqilqslnyedaldlfyimvngkrlkdisdlpldlav

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.