PDB entry 1c6v
View 1c6v on RCSB PDB site
Description: siv integrase (catalytic domain + DNA biding domain comprising residues 50-293) mutant with phe 185 replaced by his (f185h)
Class: DNA binding protein
Keywords: DNA integration, DNA binding protein
Deposited on
1999-12-21, released
2000-12-27
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-12.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.203
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (siv integrase)
Species: Simian immunodeficiency virus [TaxId:11723]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1c6va_ - Chain 'B':
Compound: protein (siv integrase)
Species: Simian immunodeficiency virus [TaxId:11723]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1c6vb_ - Chain 'C':
Compound: protein (siv integrase)
Species: Simian immunodeficiency virus [TaxId:11723]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1c6vc_ - Chain 'D':
Compound: protein (siv integrase)
Species: Simian immunodeficiency virus [TaxId:11723]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1c6vd_ - Chain 'X':
Compound: protein (siu89134)
Species: Simian immunodeficiency virus [TaxId:11723]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1c6vx_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1c6vA (A:)
ihgqvnsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwp
ithlhtdnganfasqevkmvawwagiehtfgvpynpqsqgvveamnhhlknqidrireqa
nsvetivlmavhcmnhkrrggigdmtpaerlinmitteqeiqfq
Sequence, based on observed residues (ATOM records): (download)
>1c6vA (A:)
nsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwpithlh
tdnganfasqevkmvawwagiehtfgeamnhhlknqidrireqansvetivlmavhcmnh
krrggigdmtpaerlinmitteqeiqfq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1c6vB (B:)
ihgqvnsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwp
ithlhtdnganfasqevkmvawwagiehtfgvpynpqsqgvveamnhhlknqidrireqa
nsvetivlmavhcmnhkrrggigdmtpaerlinmitteqeiqfq
Sequence, based on observed residues (ATOM records): (download)
>1c6vB (B:)
nsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwpithlh
tdnganfasqevkmvawwagiehtfgeamnhhlknqidrireqansvetivlmavhcmnh
krrggigdmtpaerlinmitte
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1c6vC (C:)
ihgqvnsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwp
ithlhtdnganfasqevkmvawwagiehtfgvpynpqsqgvveamnhhlknqidrireqa
nsvetivlmavhcmnhkrrggigdmtpaerlinmitteqeiqfq
Sequence, based on observed residues (ATOM records): (download)
>1c6vC (C:)
nsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwpithlh
tdnganfasqevkmvawwagiehtfgveamnhhlknqidrireqansvetivlmavhcmn
hkrrggigdmtpaerlinmitte
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1c6vD (D:)
ihgqvnsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwp
ithlhtdnganfasqevkmvawwagiehtfgvpynpqsqgvveamnhhlknqidrireqa
nsvetivlmavhcmnhkrrggigdmtpaerlinmitteqeiqfq
Sequence, based on observed residues (ATOM records): (download)
>1c6vD (D:)
nsdlgtwqmdcthlegkivivavhvasgfieaevipqetgrqtalfllklagrwpithlh
tdnganfasqevkmvawwagiehtfgeamnhhlknqidrireqansvetivlmavhcmnh
krrggigdmtpaerlinmitte
- Chain 'X':
Sequence, based on SEQRES records: (download)
>1c6vX (X:)
qqsknskfknfrvyyregrdqlwkgpgellwkgegavllkvgtdikvvprrkakiikdyg
ggkevdssshmedtgeareva
Sequence, based on observed residues (ATOM records): (download)
>1c6vX (X:)
knskfknfrvyyregrdqlwkgpgellwkgegavllkvgtdikvvprrkakiikd