Lineage for d1rzkg_ (1rzk G:)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.172: gp120 core [56501] (1 superfamily)
    unusual fold
  4. Superfamily d.172.1: gp120 core [56502] (1 family) (S)
  5. Family d.172.1.1: gp120 core [56503] (2 proteins)
  6. Protein gp120 core [56504] (3 species)
  7. Species Human immunodeficiency virus type 1 [TaxId:11676] [56505] (18 PDB entries)
  8. Domain d1rzkg_: 1rzk G: [98207]
    Other proteins in same PDB: d1rzkc1, d1rzkc2, d1rzkh1, d1rzkh2, d1rzkl1, d1rzkl2
    complexed with nag

Details for d1rzkg_

PDB Entry: 1rzk (more details), 2.9 Å

PDB Description: hiv-1 yu2 gp120 envelope glycoprotein complexed with cd4 and induced neutralizing antibody 17b
PDB Compounds: (G:) envelope glycoprotein gp120

SCOPe Domain Sequences for d1rzkg_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rzkg_ d.172.1.1 (G:) gp120 core {Human immunodeficiency virus type 1 [TaxId: 11676]}
lenvtenfnmwknnmveqmhediislwdqslkpcvkltplcvgagscntsvitqacpkvs
fepipihycapagfailkcndkkfngtgpctnvstvqcthgirpvvstqlllngslaeee
ivirsenftnnaktiivqlnesvvinctgaghcnlsktqwentleqiaiklkeqfgnnkt
iifnpssggdpeivthsfncggeffycnstqlftwndtrklnntgrnitlpcrikqiinm
wqevgkamyappirgqircssnitgllltrdggkdtngteifrpgggdmrdnwrselyky
kvvkie

SCOPe Domain Coordinates for d1rzkg_ are not available.

Timeline for d1rzkg_:

View in 3D
Domains from other chains:
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d1rzkc1, d1rzkc2, d1rzkh1, d1rzkh2, d1rzkl1, d1rzkl2