Lineage for Species: Swine vesicular disease virus

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 382736Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 382819Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (8 families) (S)
  5. 382820Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (9 proteins)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 383078Protein Swine vesicular disease virus coat proteins [89225] (1 species)
  7. 383079Species Swine vesicular disease virus [TaxId:12075] [89226] (2 PDB entries)

PDB entries in Species: Swine vesicular disease virus:

  1. Domain(s) for 1mqt:
    1. 383083Domain d1mqt.1: 1mqt D:,B: [91424]
    2. 383084Domain d1mqta_: 1mqt A: [91425]
    3. 383085Domain d1mqtc_: 1mqt C: [91426]
      complexed with spl
  2. Domain(s) for 1oop:
    1. 383080Domain d1oop.1: 1oop D:,B: [87203]
    2. 383081Domain d1oopa_: 1oop A: [87204]
    3. 383082Domain d1oopc_: 1oop C: [87205]
      complexed with myr, sph

More info for Species Swine vesicular disease virus [TaxId:12075] from b.121.4.1 Swine vesicular disease virus coat proteins

Timeline for Species Swine vesicular disease virus [TaxId:12075] from b.121.4.1 Swine vesicular disease virus coat proteins: