Lineage for Protein: Class II MHC alpha chain, N-terminal domain

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2937550Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2937551Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2937552Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)
  6. 2938226Protein Class II MHC alpha chain, N-terminal domain [88806] (15 species)

Species:

  1. 2938227Human (Homo sapiens), HLA-DM [TaxId:9606] [88807] (1 PDB entry)
  2. 2938229Human (Homo sapiens), HLA-DQ2 [TaxId:9606] [102833] (1 PDB entry)
  3. 2938232Human (Homo sapiens), HLA-DQ6 [TaxId:9606] [102834] (1 PDB entry)
    • Domain for 1uvq:
      • 2938233Domain d1uvqa2: 1uvq A:2-84 [100063]
        Other proteins in same PDB: d1uvqa1, d1uvqb1, d1uvqb2
        complexed with a hypocretin peptide
        complexed with acy, gly, nag, zn

        fragment; missing more than one-third of the common structure and/or sequence
  4. 2938234Human (Homo sapiens), HLA-DQ8 [TaxId:9606] [88812] (1 PDB entry)
    • Domain for 1jk8:
      • 2938235Domain d1jk8a2: 1jk8 A:2-84 [63146]
        Other proteins in same PDB: d1jk8a1, d1jk8b1, d1jk8b2
        complexed with a human insulin peptide
        complexed with nag

        fragment; missing more than one-third of the common structure and/or sequence
  5. 2938236Human (Homo sapiens), HLA-DR1 [TaxId:9606] [88808] (18 PDB entries)
    Uniprot P01903 28-207
    1. Domains for 1aqd:
      1. 2938241Domain d1aqda2: 1aqd A:3-81 [38159]
        Other proteins in same PDB: d1aqda1, d1aqdb1, d1aqdb2, d1aqdd1, d1aqde1, d1aqde2, d1aqdg1, d1aqdh1, d1aqdh2, d1aqdj1, d1aqdk1, d1aqdk2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938242Domain d1aqdd2: 1aqd D:3-81 [38161]
        Other proteins in same PDB: d1aqda1, d1aqdb1, d1aqdb2, d1aqdd1, d1aqde1, d1aqde2, d1aqdg1, d1aqdh1, d1aqdh2, d1aqdj1, d1aqdk1, d1aqdk2
        fragment; missing more than one-third of the common structure and/or sequence
      3. 2938243Domain d1aqdg2: 1aqd G:3-81 [38163]
        Other proteins in same PDB: d1aqda1, d1aqdb1, d1aqdb2, d1aqdd1, d1aqde1, d1aqde2, d1aqdg1, d1aqdh1, d1aqdh2, d1aqdj1, d1aqdk1, d1aqdk2
        fragment; missing more than one-third of the common structure and/or sequence
      4. 2938244Domain d1aqdj2: 1aqd J:3-81 [38165]
        Other proteins in same PDB: d1aqda1, d1aqdb1, d1aqdb2, d1aqdd1, d1aqde1, d1aqde2, d1aqdg1, d1aqdh1, d1aqdh2, d1aqdj1, d1aqdk1, d1aqdk2
        fragment; missing more than one-third of the common structure and/or sequence
    2. Domains for 1dlh:
      1. 2938258Domain d1dlha2: 1dlh A:3-81 [38171]
        Other proteins in same PDB: d1dlha1, d1dlhb1, d1dlhb2, d1dlhd1, d1dlhe1, d1dlhe2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938259Domain d1dlhd2: 1dlh D:3-81 [38173]
        Other proteins in same PDB: d1dlha1, d1dlhb1, d1dlhb2, d1dlhd1, d1dlhe1, d1dlhe2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    3. Domain for 1fyt:
    4. Domains for 1h15:
      1. 2938261Domain d1h15a2: 1h15 A:3-81 [76455]
        Other proteins in same PDB: d1h15a1, d1h15b1, d1h15b2, d1h15d1, d1h15e1, d1h15e2
        complexed with a peptide from epstein barr virus dna polymerase, chains C and H
        protein/DNA complex; complexed with nag

        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938262Domain d1h15d2: 1h15 D:3-81 [76459]
        Other proteins in same PDB: d1h15a1, d1h15b1, d1h15b2, d1h15d1, d1h15e1, d1h15e2
        complexed with a peptide from epstein barr virus dna polymerase, chains C and H
        protein/DNA complex; complexed with nag

        fragment; missing more than one-third of the common structure and/or sequence
    5. Domain for 1hxy:
    6. Domain for 1kg0:
    7. Domain for 1klg:
    8. Domain for 1klu:
    9. Domain for 1lo5:
    10. Domains for 1seb:
      1. 2938254Domain d1seba2: 1seb A:1-81 [38175]
        Other proteins in same PDB: d1seba1, d1sebb1, d1sebb2, d1sebd1, d1sebd2, d1sebe1, d1sebf1, d1sebf2, d1sebh1, d1sebh2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938255Domain d1sebe2: 1seb E:1-81 [38177]
        Other proteins in same PDB: d1seba1, d1sebb1, d1sebb2, d1sebd1, d1sebd2, d1sebe1, d1sebf1, d1sebf2, d1sebh1, d1sebh2
        fragment; missing more than one-third of the common structure and/or sequence
    11. Domain for 1sje:
    12. Domain for 1sjh:
    13. Domains for 1t5w:
      1. 2938245Domain d1t5wa2: 1t5w A:4-81 [106482]
        Other proteins in same PDB: d1t5wa1, d1t5wb1, d1t5wb2, d1t5wd1, d1t5we1, d1t5we2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938246Domain d1t5wd2: 1t5w D:4-81 [106486]
        Other proteins in same PDB: d1t5wa1, d1t5wb1, d1t5wb2, d1t5wd1, d1t5we1, d1t5we2
        fragment; missing more than one-third of the common structure and/or sequence
    14. Domain for 1t5x:
    15. Domain for 2seb:
    16. Domains for 4h25:
      1. 2938239Domain d4h25a1: 4h25 A:3-81 [228334]
        Other proteins in same PDB: d4h25a2, d4h25b1, d4h25b2, d4h25b3, d4h25b4, d4h25d2, d4h25e1, d4h25e2, d4h25e3, d4h25e4
        automated match to d1kg0a2
        complexed with ipa

        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938240Domain d4h25d1: 4h25 D:3-81 [228336]
        Other proteins in same PDB: d4h25a2, d4h25b1, d4h25b2, d4h25b3, d4h25b4, d4h25d2, d4h25e1, d4h25e2, d4h25e3, d4h25e4
        automated match to d1kg0a2
        complexed with ipa

        fragment; missing more than one-third of the common structure and/or sequence
    17. Domains for 4h26:
      1. 2938250Domain d4h26a1: 4h26 A:3-81 [228339]
        Other proteins in same PDB: d4h26a2, d4h26b1, d4h26b2, d4h26b3, d4h26b4, d4h26d2, d4h26e1, d4h26e2, d4h26e3, d4h26e4
        automated match to d1aqda2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938251Domain d4h26d1: 4h26 D:3-81 [228338]
        Other proteins in same PDB: d4h26a2, d4h26b1, d4h26b2, d4h26b3, d4h26b4, d4h26d2, d4h26e1, d4h26e2, d4h26e3, d4h26e4
        automated match to d1aqda2
        fragment; missing more than one-third of the common structure and/or sequence
    18. Domains for 4i5b:
      1. 2938247Domain d4i5ba1: 4i5b A:2-81 [234810]
        Other proteins in same PDB: d4i5ba2, d4i5bb1, d4i5bb2, d4i5bd2, d4i5be1, d4i5be2
        automated match to d4i5bd1
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938248Domain d4i5bd1: 4i5b D:2-81 [229424]
        Other proteins in same PDB: d4i5ba2, d4i5bb1, d4i5bb2, d4i5bd2, d4i5be1, d4i5be2
        automated match to d1aqda2
        fragment; missing more than one-third of the common structure and/or sequence
  6. 2938265Human (Homo sapiens), HLA-DR2 [TaxId:9606] [88809] (13 PDB entries)
    1. Domains for 1bx2:
      1. 2938282Domain d1bx2a2: 1bx2 A:2-81 [38183]
        Other proteins in same PDB: d1bx2a1, d1bx2b1, d1bx2b2, d1bx2d1, d1bx2e1, d1bx2e2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938283Domain d1bx2d2: 1bx2 D:2-81 [38185]
        Other proteins in same PDB: d1bx2a1, d1bx2b1, d1bx2b2, d1bx2d1, d1bx2e1, d1bx2e2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    2. Domains for 1fv1:
      1. 2938267Domain d1fv1a2: 1fv1 A:3-81 [38179]
        Other proteins in same PDB: d1fv1a1, d1fv1b1, d1fv1b2, d1fv1d1, d1fv1e1, d1fv1e2
        complexed with gol, so4
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938268Domain d1fv1d2: 1fv1 D:4-81 [38181]
        Other proteins in same PDB: d1fv1a1, d1fv1b1, d1fv1b2, d1fv1d1, d1fv1e1, d1fv1e2
        complexed with gol, so4
        fragment; missing more than one-third of the common structure and/or sequence
    3. Domain for 1hqr:
    4. Domain for 1jwm:
    5. Domain for 1jws:
    6. Domain for 1jwu:
    7. Domain for 1pyw:
    8. Domains for 1r5i:
      1. 2938275Domain d1r5ia2: 1r5i A:1-81 [97088]
        Other proteins in same PDB: d1r5ia1, d1r5ib1, d1r5ib2, d1r5id1, d1r5id2, d1r5ie1, d1r5if1, d1r5if2, d1r5ih1, d1r5ih2
        complexed with po4
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938276Domain d1r5ie2: 1r5i E:1-81 [97093]
        Other proteins in same PDB: d1r5ia1, d1r5ib1, d1r5ib2, d1r5id1, d1r5id2, d1r5ie1, d1r5if1, d1r5if2, d1r5ih1, d1r5ih2
        complexed with po4
        fragment; missing more than one-third of the common structure and/or sequence
    9. Domain for 2iam:
    10. Domains for 2ian:
      1. 2938278Domain d2iana2: 2ian A:5-81 [137163]
        Other proteins in same PDB: d2iana1, d2iana3, d2ianb1, d2ianb2, d2iand1, d2iand2, d2iane1, d2iane2, d2ianf1, d2iang1, d2iang2, d2iani1, d2iani2, d2ianj1, d2ianj2, d2iank1, d2ianl1, d2ianl2, d2iann1, d2iann2, d2iano1, d2iano2, d2ianp1, d2ianq1, d2ianq2, d2ians1, d2ians2, d2iant1, d2iant2
        automated match to d1pywa2
        mutant

        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938279Domain d2ianf2: 2ian F:3-81 [137167]
        Other proteins in same PDB: d2iana1, d2iana3, d2ianb1, d2ianb2, d2iand1, d2iand2, d2iane1, d2iane2, d2ianf1, d2iang1, d2iang2, d2iani1, d2iani2, d2ianj1, d2ianj2, d2iank1, d2ianl1, d2ianl2, d2iann1, d2iann2, d2iano1, d2iano2, d2ianp1, d2ianq1, d2ianq2, d2ians1, d2ians2, d2iant1, d2iant2
        automated match to d1jwua2
        mutant

        fragment; missing more than one-third of the common structure and/or sequence
      3. 2938280Domain d2iank2: 2ian K:3-81 [137171]
        Other proteins in same PDB: d2iana1, d2iana3, d2ianb1, d2ianb2, d2iand1, d2iand2, d2iane1, d2iane2, d2ianf1, d2iang1, d2iang2, d2iani1, d2iani2, d2ianj1, d2ianj2, d2iank1, d2ianl1, d2ianl2, d2iann1, d2iann2, d2iano1, d2iano2, d2ianp1, d2ianq1, d2ianq2, d2ians1, d2ians2, d2iant1, d2iant2
        automated match to d1jwua2
        mutant

        fragment; missing more than one-third of the common structure and/or sequence
      4. 2938281Domain d2ianp2: 2ian P:3-81 [137175]
        Other proteins in same PDB: d2iana1, d2iana3, d2ianb1, d2ianb2, d2iand1, d2iand2, d2iane1, d2iane2, d2ianf1, d2iang1, d2iang2, d2iani1, d2iani2, d2ianj1, d2ianj2, d2iank1, d2ianl1, d2ianl2, d2iann1, d2iann2, d2iano1, d2iano2, d2ianp1, d2ianq1, d2ianq2, d2ians1, d2ians2, d2iant1, d2iant2
        automated match to d1jwua2
        mutant

        fragment; missing more than one-third of the common structure and/or sequence
    11. Domain for 3c5j:
    12. Domains for 3o6f:
      1. 2938285Domain d3o6fa1: 3o6f A:5-81 [214200]
        Other proteins in same PDB: d3o6fa2, d3o6fa3, d3o6fc1, d3o6fc2, d3o6fd1, d3o6fd2, d3o6fe2, d3o6fg1, d3o6fg2, d3o6fh1, d3o6fh2
        automated match to d1pywa2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938286Domain d3o6fe1: 3o6f E:2-81 [214206]
        Other proteins in same PDB: d3o6fa2, d3o6fa3, d3o6fc1, d3o6fc2, d3o6fd1, d3o6fd2, d3o6fe2, d3o6fg1, d3o6fg2, d3o6fh1, d3o6fh2
        automated match to d1jwua2
        fragment; missing more than one-third of the common structure and/or sequence
    13. Domains for 4e41:
      1. 2938271Domain d4e41a1: 4e41 A:3-81 [220248]
        Other proteins in same PDB: d4e41a2, d4e41b1, d4e41b2, d4e41d1, d4e41d2, d4e41e1, d4e41e2, d4e41f2, d4e41g1, d4e41g2, d4e41i1, d4e41i2, d4e41j1, d4e41j2
        automated match to d1jwua2
        complexed with na; mutant

        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938272Domain d4e41f1: 4e41 F:3-81 [220256]
        Other proteins in same PDB: d4e41a2, d4e41b1, d4e41b2, d4e41d1, d4e41d2, d4e41e1, d4e41e2, d4e41f2, d4e41g1, d4e41g2, d4e41i1, d4e41i2, d4e41j1, d4e41j2
        automated match to d1jwua2
        complexed with na; mutant

        fragment; missing more than one-third of the common structure and/or sequence
  7. 2938287Human (Homo sapiens), HLA-DR3 [TaxId:9606] [88810] (1 PDB entry)
  8. 2938289Human (Homo sapiens), HLA-DR4 [TaxId:9606] [88811] (5 PDB entries)
    1. Domain for 1d5m:
    2. Domain for 1d5x:
    3. Domain for 1d5z:
    4. Domain for 1d6e:
    5. Domain for 1j8h:
  9. 2938295Mouse (Mus musculus), H2-DM [TaxId:10090] [88818] (1 PDB entry)
  10. 2938297Mouse (Mus musculus), I-A(G7) [TaxId:10090] [88817] (4 PDB entries)
    1. Domain for 1es0:
    2. Domains for 1f3j:
      1. 2938301Domain d1f3ja2: 1f3j A:1-82 [38219]
        Other proteins in same PDB: d1f3ja1, d1f3jb1, d1f3jb2, d1f3jd1, d1f3je1, d1f3je2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938302Domain d1f3jd2: 1f3j D:1-82 [38221]
        Other proteins in same PDB: d1f3ja1, d1f3jb1, d1f3jb2, d1f3jd1, d1f3je1, d1f3je2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    3. Domain for 6blq:
      • 2938298Domain d6blqa1: 6blq A:-3-82 [342998]
        Other proteins in same PDB: d6blqa2
        automated match to d1f3ja2
        complexed with edo, ipa, nag

        fragment; missing more than one-third of the common structure and/or sequence
    4. Domain for 6blx:
      • 2938299Domain d6blxa1: 6blx A:1-84 [342993]
        Other proteins in same PDB: d6blxa2
        automated match to d1f3ja2
        complexed with edo, fmt, nag

        fragment; missing more than one-third of the common structure and/or sequence
  11. 2938303Mouse (Mus musculus), I-AB [TaxId:10090] [88815] (4 PDB entries)
    1. Domains for 1lnu:
      1. 2938305Domain d1lnua2: 1lnu A:1-83 [74098]
        Other proteins in same PDB: d1lnua1, d1lnub1, d1lnub2, d1lnuc1, d1lnud1, d1lnud2, d1lnue1, d1lnuf1, d1lnuf2, d1lnug1, d1lnuh1, d1lnuh2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938306Domain d1lnuc2: 1lnu C:1-83 [74102]
        Other proteins in same PDB: d1lnua1, d1lnub1, d1lnub2, d1lnuc1, d1lnud1, d1lnud2, d1lnue1, d1lnuf1, d1lnuf2, d1lnug1, d1lnuh1, d1lnuh2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      3. 2938307Domain d1lnue2: 1lnu E:1-83 [74106]
        Other proteins in same PDB: d1lnua1, d1lnub1, d1lnub2, d1lnuc1, d1lnud1, d1lnud2, d1lnue1, d1lnuf1, d1lnuf2, d1lnug1, d1lnuh1, d1lnuh2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      4. 2938308Domain d1lnug2: 1lnu G:1-83 [74110]
        Other proteins in same PDB: d1lnua1, d1lnub1, d1lnub2, d1lnuc1, d1lnud1, d1lnud2, d1lnue1, d1lnuf1, d1lnuf2, d1lnug1, d1lnuh1, d1lnuh2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    2. Domain for 1muj:
    3. Domains for 3c5z:
      1. 2938310Domain d3c5zc2: 3c5z C:1-83 [155954]
        Other proteins in same PDB: d3c5za1, d3c5za2, d3c5zb1, d3c5zb2, d3c5zc1, d3c5zd1, d3c5zd2, d3c5ze1, d3c5ze2, d3c5zf1, d3c5zf2, d3c5zg1, d3c5zh1, d3c5zh2
        automated match to d1lnua2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938311Domain d3c5zg2: 3c5z G:1-83 [155958]
        Other proteins in same PDB: d3c5za1, d3c5za2, d3c5zb1, d3c5zb2, d3c5zc1, d3c5zd1, d3c5zd2, d3c5ze1, d3c5ze2, d3c5zf1, d3c5zf2, d3c5zg1, d3c5zh1, d3c5zh2
        automated match to d1lnua2
        fragment; missing more than one-third of the common structure and/or sequence
    4. Domain for 3cup:
      • 2938309Domain d3cupa1: 3cup A:1A-83 [245561]
        Other proteins in same PDB: d3cupa2, d3cupa3
        automated match to d1muja2
        complexed with epe, nag

        fragment; missing more than one-third of the common structure and/or sequence
  12. 2938312Mouse (Mus musculus), I-AD [TaxId:10090] [88816] (2 PDB entries)
    1. Domain for 1iao:
    2. Domain for 2iad:
  13. 2938315Mouse (Mus musculus), I-AK [TaxId:10090] [88813] (7 PDB entries)
    1. Domains for 1d9k:
      1. 2938321Domain d1d9kc2: 1d9k C:1-81 [38201]
        Other proteins in same PDB: d1d9ka_, d1d9kb_, d1d9kc1, d1d9kd1, d1d9kd2, d1d9ke_, d1d9kf_, d1d9kg1, d1d9kh1, d1d9kh2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938322Domain d1d9kg2: 1d9k G:1-81 [38203]
        Other proteins in same PDB: d1d9ka_, d1d9kb_, d1d9kc1, d1d9kd1, d1d9kd2, d1d9ke_, d1d9kf_, d1d9kg1, d1d9kh1, d1d9kh2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    2. Domain for 1iak:
    3. Domain for 1jl4:
    4. Domain for 2p24:
    5. Domain for 6mng:
    6. Domain for 6mnn:
    7. Domain for 6mno:
  14. 2938324Mouse (Mus musculus), I-AU [TaxId:10090] [89859] (13 PDB entries)
    1. Domain for 1k2d:
    2. Domains for 1u3h:
      1. 2938334Domain d1u3hc2: 1u3h C:4-81 [119511]
        Other proteins in same PDB: d1u3ha1, d1u3hb1, d1u3hc1, d1u3hc3, d1u3hd1, d1u3hd2, d1u3he_, d1u3hf_, d1u3hg1, d1u3hg3, d1u3hh1, d1u3hh2
        automated match to d2p24a2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938335Domain d1u3hg2: 1u3h G:4-81 [119515]
        Other proteins in same PDB: d1u3ha1, d1u3hb1, d1u3hc1, d1u3hc3, d1u3hd1, d1u3hd2, d1u3he_, d1u3hf_, d1u3hg1, d1u3hg3, d1u3hh1, d1u3hh2
        automated match to d2p24a2
        fragment; missing more than one-third of the common structure and/or sequence
    3. Domain for 1ymm:
    4. Domains for 1zgl:
      1. 2938337Domain d1zgla2: 1zgl A:13-81 [125032]
        Other proteins in same PDB: d1zgla1, d1zglb1, d1zglb2, d1zgld1, d1zgle1, d1zgle2, d1zglg1, d1zglh1, d1zglh2, d1zglj1, d1zglk1, d1zglk2, d1zglp1, d1zglp2, d1zglp3, d1zglr1, d1zglr2, d1zglr3, d1zglt1, d1zglt2, d1zglt3, d1zglv1, d1zglv2, d1zglv3
        automatically matched to d1k2da2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938338Domain d1zgld2: 1zgl D:13-81 [125036]
        Other proteins in same PDB: d1zgla1, d1zglb1, d1zglb2, d1zgld1, d1zgle1, d1zgle2, d1zglg1, d1zglh1, d1zglh2, d1zglj1, d1zglk1, d1zglk2, d1zglp1, d1zglp2, d1zglp3, d1zglr1, d1zglr2, d1zglr3, d1zglt1, d1zglt2, d1zglt3, d1zglv1, d1zglv2, d1zglv3
        automatically matched to d1k2da2
        fragment; missing more than one-third of the common structure and/or sequence
      3. 2938339Domain d1zglg2: 1zgl G:13-81 [125040]
        Other proteins in same PDB: d1zgla1, d1zglb1, d1zglb2, d1zgld1, d1zgle1, d1zgle2, d1zglg1, d1zglh1, d1zglh2, d1zglj1, d1zglk1, d1zglk2, d1zglp1, d1zglp2, d1zglp3, d1zglr1, d1zglr2, d1zglr3, d1zglt1, d1zglt2, d1zglt3, d1zglv1, d1zglv2, d1zglv3
        automatically matched to d1k2da2
        fragment; missing more than one-third of the common structure and/or sequence
      4. 2938340Domain d1zglj2: 1zgl J:13-81 [125044]
        Other proteins in same PDB: d1zgla1, d1zglb1, d1zglb2, d1zgld1, d1zgle1, d1zgle2, d1zglg1, d1zglh1, d1zglh2, d1zglj1, d1zglk1, d1zglk2, d1zglp1, d1zglp2, d1zglp3, d1zglr1, d1zglr2, d1zglr3, d1zglt1, d1zglt2, d1zglt3, d1zglv1, d1zglv2, d1zglv3
        automatically matched to d1k2da2
        fragment; missing more than one-third of the common structure and/or sequence
    5. Domain for 2g9h:
    6. Domains for 2icw:
      1. 2938328Domain d2icwa2: 2icw A:13-81 [137244]
        Other proteins in same PDB: d2icwa1, d2icwb1, d2icwb2, d2icwd1, d2icwe1, d2icwe2, d2icwg_, d2icwh_, d2icwj1, d2icwj2, d2icwl2, d2icwl3
        automatically matched to d1k2da2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938329Domain d2icwd2: 2icw D:13-81 [137248]
        Other proteins in same PDB: d2icwa1, d2icwb1, d2icwb2, d2icwd1, d2icwe1, d2icwe2, d2icwg_, d2icwh_, d2icwj1, d2icwj2, d2icwl2, d2icwl3
        automatically matched to d1k2da2
        fragment; missing more than one-third of the common structure and/or sequence
    7. Domain for 2ipk:
    8. Domains for 2oje:
      1. 2938332Domain d2ojea2: 2oje A:13-81 [139104]
        Other proteins in same PDB: d2ojea1, d2ojeb1, d2ojeb2, d2ojed1, d2ojee1, d2ojef1, d2ojef2, d2ojeh1
        automatically matched to d1k2da2
        complexed with po4

        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938333Domain d2ojee2: 2oje E:13-81 [139109]
        Other proteins in same PDB: d2ojea1, d2ojeb1, d2ojeb2, d2ojed1, d2ojee1, d2ojef1, d2ojef2, d2ojeh1
        automatically matched to d1k2da2
        complexed with po4

        fragment; missing more than one-third of the common structure and/or sequence
    9. Domain for 2pxy:
    10. Domain for 2z31:
    11. Domains for 3c60:
      1. 2938341Domain d3c60c2: 3c60 C:1-82 [155962]
        Other proteins in same PDB: d3c60a1, d3c60a2, d3c60b1, d3c60b2, d3c60c1, d3c60d1, d3c60d2, d3c60e1, d3c60e2, d3c60f1, d3c60f2, d3c60g1, d3c60h1, d3c60h2
        automated match to d2pxyc2
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938342Domain d3c60g2: 3c60 G:1-82 [155966]
        Other proteins in same PDB: d3c60a1, d3c60a2, d3c60b1, d3c60b2, d3c60c1, d3c60d1, d3c60d2, d3c60e1, d3c60e2, d3c60f1, d3c60f2, d3c60g1, d3c60h1, d3c60h2
        automated match to d2pxyc2
        fragment; missing more than one-third of the common structure and/or sequence
    12. Domains for 3c6l:
      1. 2938344Domain d3c6lc2: 3c6l C:1-82 [155980]
        Other proteins in same PDB: d3c6la1, d3c6la2, d3c6lc1, d3c6ld1, d3c6ld2, d3c6le1, d3c6le2, d3c6lg1, d3c6lh1, d3c6lh2
        automatically matched to d1k2da2
        complexed with ca

        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938345Domain d3c6lg2: 3c6l G:1-82 [155986]
        Other proteins in same PDB: d3c6la1, d3c6la2, d3c6lc1, d3c6ld1, d3c6ld2, d3c6le1, d3c6le2, d3c6lg1, d3c6lh1, d3c6lh2
        automatically matched to d1k2da2
        complexed with ca

        fragment; missing more than one-third of the common structure and/or sequence
    13. Domain for 4p46:
  15. 2938346Mouse (Mus musculus), I-EK [TaxId:10090] [88814] (9 PDB entries)
    1. Domains for 1fne:
      1. 2938349Domain d1fnea2: 1fne A:1-81 [59897]
        Other proteins in same PDB: d1fnea1, d1fneb1, d1fneb2, d1fnec1, d1fned1, d1fned2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938350Domain d1fnec2: 1fne C:1-81 [59901]
        Other proteins in same PDB: d1fnea1, d1fneb1, d1fneb2, d1fnec1, d1fned1, d1fned2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    2. Domains for 1fng:
      1. 2938347Domain d1fnga2: 1fng A:1-81 [59905]
        Other proteins in same PDB: d1fnga1, d1fngb1, d1fngb2, d1fngc1, d1fngd1, d1fngd2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938348Domain d1fngc2: 1fng C:1-81 [59909]
        Other proteins in same PDB: d1fnga1, d1fngb1, d1fngb2, d1fngc1, d1fngd1, d1fngd2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    3. Domains for 1i3r:
      1. 2938355Domain d1i3ra2: 1i3r A:1-81 [61621]
        Other proteins in same PDB: d1i3ra1, d1i3rb1, d1i3rb2, d1i3rc1, d1i3rd1, d1i3rd2, d1i3re1, d1i3rf1, d1i3rf2, d1i3rg1, d1i3rh1, d1i3rh2
        complexed with nag; mutant
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938356Domain d1i3rc2: 1i3r C:1-81 [61625]
        Other proteins in same PDB: d1i3ra1, d1i3rb1, d1i3rb2, d1i3rc1, d1i3rd1, d1i3rd2, d1i3re1, d1i3rf1, d1i3rf2, d1i3rg1, d1i3rh1, d1i3rh2
        complexed with nag; mutant
        fragment; missing more than one-third of the common structure and/or sequence
      3. 2938357Domain d1i3re2: 1i3r E:1-81 [61629]
        Other proteins in same PDB: d1i3ra1, d1i3rb1, d1i3rb2, d1i3rc1, d1i3rd1, d1i3rd2, d1i3re1, d1i3rf1, d1i3rf2, d1i3rg1, d1i3rh1, d1i3rh2
        complexed with nag; mutant
        fragment; missing more than one-third of the common structure and/or sequence
      4. 2938358Domain d1i3rg2: 1i3r G:1-81 [61633]
        Other proteins in same PDB: d1i3ra1, d1i3rb1, d1i3rb2, d1i3rc1, d1i3rd1, d1i3rd2, d1i3re1, d1i3rf1, d1i3rf2, d1i3rg1, d1i3rh1, d1i3rh2
        complexed with nag; mutant
        fragment; missing more than one-third of the common structure and/or sequence
    4. Domains for 1iea:
      1. 2938353Domain d1ieaa2: 1iea A:1-81 [38205]
        Other proteins in same PDB: d1ieaa1, d1ieab1, d1ieab2, d1ieac1, d1iead1, d1iead2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938354Domain d1ieac2: 1iea C:1-81 [38207]
        Other proteins in same PDB: d1ieaa1, d1ieab1, d1ieab2, d1ieac1, d1iead1, d1iead2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    5. Domains for 1ieb:
      1. 2938361Domain d1ieba2: 1ieb A:1-81 [38209]
        Other proteins in same PDB: d1ieba1, d1iebb1, d1iebb2, d1iebc1, d1iebd1, d1iebd2
        complexed with nag, so4
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938362Domain d1iebc2: 1ieb C:1-81 [38211]
        Other proteins in same PDB: d1ieba1, d1iebb1, d1iebb2, d1iebc1, d1iebd1, d1iebd2
        complexed with nag, so4
        fragment; missing more than one-third of the common structure and/or sequence
    6. Domains for 1kt2:
      1. 2938363Domain d1kt2a2: 1kt2 A:1-81 [72952]
        Other proteins in same PDB: d1kt2a1, d1kt2b1, d1kt2b2, d1kt2c1, d1kt2d1, d1kt2d2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938364Domain d1kt2c2: 1kt2 C:1-81 [72956]
        Other proteins in same PDB: d1kt2a1, d1kt2b1, d1kt2b2, d1kt2c1, d1kt2d1, d1kt2d2
        complexed with nag
        fragment; missing more than one-third of the common structure and/or sequence
    7. Domains for 1ktd:
      1. 2938359Domain d1ktda2: 1ktd A:1-81 [72965]
        Other proteins in same PDB: d1ktda1, d1ktdb1, d1ktdb2, d1ktdc1, d1ktdd1, d1ktdd2
        complexed with nag, so4
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938360Domain d1ktdc2: 1ktd C:1-81 [72969]
        Other proteins in same PDB: d1ktda1, d1ktdb1, d1ktdb2, d1ktdc1, d1ktdd1, d1ktdd2
        complexed with nag, so4
        fragment; missing more than one-third of the common structure and/or sequence
    8. Domains for 1r5v:
      1. 2938351Domain d1r5va2: 1r5v A:3-81 [97117]
        Other proteins in same PDB: d1r5va1, d1r5vb1, d1r5vb2, d1r5vb3, d1r5vc1, d1r5vd1, d1r5vd2, d1r5vd3
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938352Domain d1r5vc2: 1r5v C:3-81 [97121]
        Other proteins in same PDB: d1r5va1, d1r5vb1, d1r5vb2, d1r5vb3, d1r5vc1, d1r5vd1, d1r5vd2, d1r5vd3
        fragment; missing more than one-third of the common structure and/or sequence
    9. Domains for 1r5w:
      1. 2938365Domain d1r5wa2: 1r5w A:3-81 [97125]
        Other proteins in same PDB: d1r5wa1, d1r5wb1, d1r5wb2, d1r5wb3, d1r5wc1, d1r5wd1, d1r5wd2, d1r5wd3
        fragment; missing more than one-third of the common structure and/or sequence
      2. 2938366Domain d1r5wc2: 1r5w C:3-81 [97129]
        Other proteins in same PDB: d1r5wa1, d1r5wb1, d1r5wb2, d1r5wb3, d1r5wc1, d1r5wd1, d1r5wd2, d1r5wd3
        fragment; missing more than one-third of the common structure and/or sequence

More info for Protein Class II MHC alpha chain, N-terminal domain from d.19.1.1: MHC antigen-recognition domain

Timeline for Protein Class II MHC alpha chain, N-terminal domain from d.19.1.1: MHC antigen-recognition domain:

  • Protein Class II MHC alpha chain, N-terminal domain from d.19.1.1: MHC antigen-recognition domain first appeared in SCOP 1.65
  • Protein Class II MHC alpha chain, N-terminal domain from d.19.1.1: MHC antigen-recognition domain appears in SCOPe 2.07