SCOP 1.65: Domain d1omib2: 1omi B:2138-2237

Lineage for d1omib2 (1omi B:2138-2237)

1. Root: SCOP 1.65

2. Class b: All beta proteins [48724] (126 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.3: cAMP-binding domain-like [51206] (3 families)

5. Family b.82.3.3: Listeriolysin regulatory protein PrfA, N-terminal domain [89419] (1 protein)

6. Protein Listeriolysin regulatory protein PrfA, N-terminal domain [89420] (1 species)

7. Species Bacteria (Listeria monocytogenes) [TaxId:1639] [89421] (1 PDB entry)

8. Domain d1omib2: 1omi B:2138-2237 [87082]
   Other proteins in same PDB: d1omia1, d1omib1
   complexed with gol

Details for d1omib2

PDB Entry: 1omi, 2.8 Å

PDB Description: crystal structure of prfa,the transcriptional regulator in listeria monocytogenes

SCOP Domain Sequences for d1omib2:

Sequence, based on SEQRES records:

>d1omib2 b.82.3.3 (B:2138-2237) Listeriolysin regulatory protein PrfA, N-terminal domain {Bacteria (Listeria monocytogenes)}
gklgsicgqlliltyvygketpdgikitldnltmqelgyssgiahssavsriisklkqek
vivyknscfyvqnldylkryapkldewfylacpatwgkln

Sequence, based on observed residues (ATOM records):

>d1omib2 b.82.3.3 (B:2138-2237) Listeriolysin regulatory protein PrfA, N-terminal domain {Bacteria (Listeria monocytogenes)}
gklgsicgqlliltyvygketpdgikitldnltmqelgyssavsriisklkqekvivykn
scfyvqnldylkryapkldewfylacpatwgkln

Timeline for d1omib2:

• d1omib2 is new in SCOP 1.65
  
• d1omib2 appears in SCOP 1.67
  
• d1omib2 appears in the current release, SCOPe 2.08