Lineage for d1mxda2 (1mxd A:1-361)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2829944Protein Bacterial alpha-amylase [51447] (10 species)
  7. 2829991Species Pyrococcus woesei [TaxId:2262] [89464] (3 PDB entries)
  8. 2829993Domain d1mxda2: 1mxd A:1-361 [85192]
    Other proteins in same PDB: d1mxda1
    complexed with act, ca, glc, zn
    has additional insertions and/or extensions that are not grouped together

Details for d1mxda2

PDB Entry: 1mxd (more details), 2 Å

PDB Description: structure of a (ca,zn)-dependent alpha-amylase from the hyperthermophilic archaeon pyrococcus woesei
PDB Compounds: (A:) alpha amylase

SCOPe Domain Sequences for d1mxda2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mxda2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Pyrococcus woesei [TaxId: 2262]}
akyleleeggvimqafywdvpgggiwwdhirskipewyeagisaiwlpppskgmsggysm
gydpydyfdlgeyyqkgtvetrfgskeelvrliqtahaygikviadvvinhraggdlewn
pfvgdytwtdfskvasgkytanyldfhpnelhccdegtfggfpdichhkewdqywlwksn
esyaaylrsigfdgwrfdyvkgygawvvrdwlnwwggwavgeywdtnvdallswayesga
kvfdfplyykmdeafdnnnipalvyalqngqtvvsrdpfkavtfvanhdtdiiwnkypay
afiltyegqpvifyrdfeewlnkdklinliwihdhlaggsttivyydndelifvrngdsr
r

SCOPe Domain Coordinates for d1mxda2:

Click to download the PDB-style file with coordinates for d1mxda2.
(The format of our PDB-style files is described here.)

Timeline for d1mxda2:

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Domains from same chain:
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d1mxda1