SCOPe 2.04: Domain d1go3e1: 1go3 E:79-184

Lineage for d1go3e1 (1go3 E:79-184)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.40: OB-fold [50198] (16 superfamilies)
   barrel, closed or partly opened n=5, S=10 or S=8; greek-key

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)

5. Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (31 proteins)
   barrel, closed; n=5, S=8

6. Protein C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) [88670] (3 species)

7. Species Methanococcus jannaschii [TaxId:2190] [88671] (1 PDB entry)

8. Domain d1go3e1: 1go3 E:79-184 [83054]
   Other proteins in same PDB: d1go3e2, d1go3f_, d1go3m2, d1go3n_
   protein/DNA complex; protein/RNA complex

Details for d1go3e1

PDB Entry: 1go3, 1.75 Å

PDB Description: structure of an archeal homolog of the eukaryotic rna polymerase ii rpb4/rpb7 complex

PDB Compounds: (E:) DNA-directed RNA polymerase subunit e

SCOPe Domain Sequences for d1go3e1:

Sequence, based on SEQRES records:

>d1go3e1 b.40.4.5 (E:79-184) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Methanococcus jannaschii [TaxId: 2190]}
pemyeliegevvdvvefgsfvrlgpldglihvsqimddyvsydpkreaiigketgkvlei
gdyvrarivaislkaerkrgskialtmrqpylgklewieeekakkq

Sequence, based on observed residues (ATOM records):

>d1go3e1 b.40.4.5 (E:79-184) C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) {Methanococcus jannaschii [TaxId: 2190]}
pemyeliegevvdvvefgsfvrlgpldglihvsqimddyvsydpkaiigketgkvleigd
yvrarivaislkaskialtmrqpylgklewieeekakkq

Timeline for d1go3e1:

• d1go3e1 first appeared in SCOP 1.65
  
• d1go3e1 appears in SCOPe 2.03
  
• d1go3e1 appears in SCOPe 2.05
  
• d1go3e1 appears in the current release, SCOPe 2.08