SCOPe 2.03: Domain d1kdha4: 1kdh A:303-510

Lineage for d1kdha4 (1kdh A:303-510)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
   core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123

4. Superfamily d.218.1: Nucleotidyltransferase [81301] (15 families)

5. Family d.218.1.2: DNA polymerase beta-like [81300] (4 proteins)
   insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain

6. Protein Terminal deoxynucleotidyl transferase [81581] (1 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [81580] (3 PDB entries)

8. Domain d1kdha4: 1kdh A:303-510 [75883]
   Other proteins in same PDB: d1kdha1, d1kdha3
   protein/DNA complex; complexed with mg, na

Details for d1kdha4

PDB Entry: 1kdh, 3 Å

PDB Description: binary complex of murine terminal deoxynucleotidyl transferase with a primer single stranded dna

PDB Compounds: (A:) Terminal deoxynucleotidyltransferase short isoform

SCOPe Domain Sequences for d1kdha4:

Sequence, based on SEQRES records:

>d1kdha4 d.218.1.2 (A:303-510) Terminal deoxynucleotidyl transferase {Mouse (Mus musculus) [TaxId: 10090]}
vnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqll
hkvtdfwkqqglllycdilestfekfkqpsrkvdaldhfqkcflilkldhgrvhseksgq
qegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtk
rvfleaeseeeifahlgldyiepwerna

Sequence, based on observed residues (ATOM records):

>d1kdha4 d.218.1.2 (A:303-510) Terminal deoxynucleotidyl transferase {Mouse (Mus musculus) [TaxId: 10090]}
vnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflitspeatedeeqqll
hkvtdfwkqqglllycdilestfekfkqpsrldhfqkcflilkldhgrvhseksegkgwk
airvdlvmcpydrrafallgwtgsrqferdlrryatherkmmldnhalydrtkrvfleae
seeeifahlgldyiepwerna

Timeline for d1kdha4:

• d1kdha4 first appeared in SCOP 1.63
  
• d1kdha4 appears in SCOPe 2.02
  
• d1kdha4 appears in SCOPe 2.04
  
• d1kdha4 appears in the current release, SCOPe 2.08