Lineage for d1m56h1 (1m56 H:130-289)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II [49541] (3 proteins)
  6. Protein Cytochrome c oxidase [49544] (4 species)
  7. Species Rhodobacter sphaeroides [TaxId:1063] [74870] (7 PDB entries)
  8. Domain d1m56h1: 1m56 H:130-289 [74477]
    Other proteins in same PDB: d1m56a_, d1m56b2, d1m56c_, d1m56d_, d1m56g_, d1m56h2, d1m56i_, d1m56j_
    complexed with 3pe, ca, cu, hea, mg

Details for d1m56h1

PDB Entry: 1m56 (more details), 2.3 Å

PDB Description: structure of cytochrome c oxidase from rhodobactor sphaeroides (wild type)
PDB Compounds: (H:) cytochrome c oxidase

SCOPe Domain Sequences for d1m56h1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1m56h1 b.6.1.2 (H:130-289) Cytochrome c oxidase {Rhodobacter sphaeroides [TaxId: 1063]}
peadvtvkvtgyqwywgyeypdeeisfesymigspatggdnrmspeveqqlieagysrde
fllatdtamvvpvnktvvvqvtgadvihswtvpafgvkqdavpgrlaqlwfraeregiff
gqcselcgishaympitvkvvseeayaawleqarggtyel

SCOPe Domain Coordinates for d1m56h1 are not available.

Timeline for d1m56h1:

View in 3D
Domains from same chain:
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d1m56h2
View in 3D
Domains from other chains:
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d1m56a_, d1m56b1, d1m56b2, d1m56c_, d1m56d_, d1m56g_, d1m56i_, d1m56j_