Lineage for Family d.79.5.1: IpsF-like

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2180205Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 2180995Superfamily d.79.5: IpsF-like [69765] (2 families) (S)
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. 2180996Family d.79.5.1: IpsF-like [69766] (3 protein domains)
    automatically mapped to Pfam PF02542

Protein Domains:

  1. 21809972C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767] (6 species)
    1. 2180998Species Escherichia coli K-12 [TaxId:83333] [188969] (5 PDB entries)
    2. 2181011Species Escherichia coli [TaxId:562] [69768] (14 PDB entries)
      Uniprot P62617 ! Uniprot P36663
    3. 2181043Species Haemophilus influenzae [TaxId:727] [75479] (3 PDB entries)
    4. 2181059Species Shewanella oneidensis [TaxId:70863] [118026] (1 PDB entry)
      Uniprot Q8EBR3
    5. 2181063Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [187992] (1 PDB entry)
    6. 2181065Species Thermus thermophilus [TaxId:274] [82720] (4 PDB entries)
  2. 2181090IspD/ispF bifunctional enzyme, MECDP synthase domain [118027] (1 species)
  3. 2181094automated matches [190985] (5 species)
    not a true protein
    1. 2181095Species Burkholderia pseudomallei [TaxId:28450] [189021] (2 PDB entries)
    2. 2181102Species Salmonella typhimurium [TaxId:90371] [189751] (2 PDB entries)
    3. 2181112Species Yersinia pestis [TaxId:214092] [188680] (2 PDB entries)
    4. 2289034Species Bacillus subtilis [TaxId:224308] [332335] (2 PDB entries)
    5. 2297578Species Burkholderia pseudomallei [TaxId:357348] [340879] (1 PDB entry)

More info for Family d.79.5.1: IpsF-like

Timeline for Family d.79.5.1: IpsF-like: