SCOP 1.65: Domain d1gqcb_: 1gqc B:

Lineage for d1gqcb_ (1gqc B:)

1. Root: SCOP 1.65

2. Class c: Alpha and beta proteins (a/b) [51349] (121 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (13 families)

5. Family c.68.1.13: Cytidylytransferase [68901] (3 proteins)

6. Protein CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase, KdsB [64143] (1 species)

7. Species Escherichia coli [TaxId:562] [64144] (8 PDB entries)

8. Domain d1gqcb_: 1gqc B: [65469]
   complexed with c5p, cmk, mg

Details for d1gqcb_

PDB Entry: 1gqc, 2.6 Å

PDB Description: the structure of cmp:2-keto-3-deoxy-manno-octonic acid synthetase complexed with cmp-kdo at 100k

SCOP Domain Sequences for d1gqcb_:

Sequence; same for both SEQRES and ATOM records:

>d1gqcb_ c.68.1.13 (B:) CMP:2-keto-3-deoxy-manno-octonic acid (CMP-KDO)synthetase, KdsB {Escherichia coli}
skaviviparygssrlpgkplldivgkpmiqhvyeralqvagvaevwvatddprveqavq
afggkaimtrndhesgtdrlvevmhkveadiyinlqgdepmirprdvetllqgmrddpal
pvatlchaisaaeaaepstvkvvvntrqdalyfsrspipyprnaekarylkhvgiyayrr
dvlqnysqlpesmpeqaesleqlrlmnaginirtfevaatgpgvdtpaclekvralmaqe
l

Timeline for d1gqcb_:

• d1gqcb_ first appeared in SCOP 1.59
  
• d1gqcb_ appears in SCOP 1.63
  
• d1gqcb_ appears in SCOP 1.67
  
• d1gqcb_ appears in the current release, SCOPe 2.08