Lineage for Family c.77.1.1: Dimeric isocitrate & isopropylmalate dehydrogenases

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1619978Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
    consists of two intertwined (sub)domains related by pseudo dyad; duplication
    3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest
  4. 1619979Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families) (S)
    the constituent families form similar dimers
  5. 1619980Family c.77.1.1: Dimeric isocitrate & isopropylmalate dehydrogenases [53660] (4 proteins)
    the active site is between the two identical subunits

Proteins:

  1. 16199813-isopropylmalate dehydrogenase, IPMDH [53661] (11 species)
    1. 1619982Species Bacillus coagulans [TaxId:1398] [53664] (1 PDB entry)
    2. 1619985Species Bacillus sp. [TaxId:1409] [254872] (1 PDB entry)
    3. 1619987Species Chimera (Thermus thermophilus) and (Bacillus subtilis) [TaxId:274] [53663] (2 PDB entries)
    4. 1619990Species Escherichia coli [TaxId:562] [53667] (1 PDB entry)
    5. 1619993Species Mycobacterium tuberculosis [TaxId:1773] [117725] (2 PDB entries)
      Uniprot P95313
    6. 1620002Species Salmonella typhimurium [TaxId:90371] [53666] (1 PDB entry)
    7. 1620005Species Shewanella benthica [TaxId:43661] [195907] (1 PDB entry)
    8. 1620008Species Sulfolobus tokodaii [TaxId:111955] [117724] (1 PDB entry)
      Uniprot P50455
    9. 1620011Species Thermotoga maritima [TaxId:2336] [110714] (1 PDB entry)
      Uniprot Q9WZ26
    10. 1620013Species Thermus thermophilus [TaxId:274] [53662] (14 PDB entries)
    11. 1620036Species Thiobacillus ferrooxidans [TaxId:920] [53665] (1 PDB entry)
  2. 1620039Isocitrate dehydrogenase, ICDH [53668] (2 species)
    1. 1620040Species Bacillus subtilis [TaxId:1423] [64171] (1 PDB entry)
    2. 1620043Species Escherichia coli [TaxId:562] [53669] (27 PDB entries)
  3. 1620071NADP-dependent isocitrate dehydrogenase [82524] (2 species)
    1. 1620072Species Human (Homo sapiens) [TaxId:9606] [110715] (2 PDB entries)
      Uniprot O75874
    2. 1620079Species Pig (Sus scrofa) [TaxId:9823] [82525] (2 PDB entries)
  4. 1620086automated matches [190072] (18 species)
    not a true protein
    1. 1620087Species Acidithiobacillus thiooxidans [TaxId:930] [187607] (1 PDB entry)
    2. 1620092Species Archaeoglobus fulgidus [TaxId:2234] [187335] (1 PDB entry)
    3. 1620095Species Bacillus coagulans [TaxId:1398] [186792] (2 PDB entries)
    4. 1620106Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [225478] (4 PDB entries)
    5. 1620129Species Burkholderia pseudomallei [TaxId:28450] [188497] (1 PDB entry)
    6. 1620131Species Burkholderia thailandensis [TaxId:271848] [193254] (1 PDB entry)
    7. 1620134Species Campylobacter jejuni [TaxId:197] [189804] (2 PDB entries)
    8. 1620144Species Escherichia coli K-12 [TaxId:83333] [189313] (1 PDB entry)
    9. 1620147Species Escherichia coli [TaxId:562] [193425] (5 PDB entries)
    10. 1620153Species Escherichia coli [TaxId:833333] [194427] (1 PDB entry)
    11. 1620155Species Human (Homo sapiens) [TaxId:9606] [189131] (9 PDB entries)
    12. 1620184Species Mouse (Mus musculus) [TaxId:10090] [187557] (2 PDB entries)
    13. 1620189Species Mycobacterium tuberculosis [TaxId:1773] [193947] (1 PDB entry)
    14. 1620192Species Shewanella oneidensis [TaxId:211586] [194175] (8 PDB entries)
    15. 1620201Species Sinorhizobium meliloti [TaxId:266834] [226269] (1 PDB entry)
    16. 1620204Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [256054] (1 PDB entry)
    17. 1620209Species Thermus thermophilus HB8 [TaxId:300852] [192453] (1 PDB entry)
    18. 1620214Species Thermus thermophilus [TaxId:274] [189081] (6 PDB entries)

More info for Family c.77.1.1: Dimeric isocitrate & isopropylmalate dehydrogenases

Timeline for Family c.77.1.1: Dimeric isocitrate & isopropylmalate dehydrogenases: