SCOPe 2.08: Protein: Elongation factor G (EF-G), N-terminal (G) domain

Lineage for Protein: Elongation factor G (EF-G), N-terminal (G) domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
division into families based on beta-sheet topologies
Family c.37.1.8: G proteins [52592] (81 proteins)
core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
Protein Elongation factor G (EF-G), N-terminal (G) domain [52633] (2 species)
has internal nucleotide exchange factor built in as an insertion subdomain

Species:

Thermus thermophilus [TaxId:274] [52634] (9 PDB entries)
residues 160-252 comprise insertion subdomain

Domain for 1dar:
- Domain d1dara2: 1dar A:1-282 [32142]
  Other proteins in same PDB: d1dara1, d1dara3, d1dara4
  complexed with gdp
  has additional subdomain(s) that are not in the common domain
Domain for 1efg:
- Domain d1efga2: 1efg A:1-282 [32146]
  Other proteins in same PDB: d1efga1, d1efga3, d1efga4
  complexed with gdp
  has additional subdomain(s) that are not in the common domain
Domain for 1elo:
- Domain d1eloa2: 1elo A:5-282 [32145]
  Other proteins in same PDB: d1eloa1, d1eloa3, d1eloa4
  has additional subdomain(s) that are not in the common domain
Domain for 1fnm:
- Domain d1fnma2: 1fnm A:6-282 [32144]
  Other proteins in same PDB: d1fnma1, d1fnma3, d1fnma4, d1fnma5
  complexed with gdp, mg
  has additional subdomain(s) that are not in the common domain
Domains for 1ktv:
1. Domain d1ktva2: 1ktv A:5-282 [91028]
  Other proteins in same PDB: d1ktva1, d1ktva3, d1ktva4, d1ktvb1, d1ktvb3, d1ktvb4
  has additional subdomain(s) that are not in the common domain
2. Domain d1ktvb2: 1ktv B:5-282 [91032]
  Other proteins in same PDB: d1ktva1, d1ktva3, d1ktva4, d1ktvb1, d1ktvb3, d1ktvb4
  has additional subdomain(s) that are not in the common domain

Domain for 2bm0:

Domain d2bm0a2: 2bm0 A:4-282 [128749]
Other proteins in same PDB: d2bm0a1, d2bm0a3, d2bm0a4, d2bm0a5
automatically matched to d1dar_2
complexed with gdp, mg; mutant
has additional subdomain(s) that are not in the common domain

Domain for 2bm1:

Domain d2bm1a2: 2bm1 A:4-282 [128754]
Other proteins in same PDB: d2bm1a1, d2bm1a3, d2bm1a4, d2bm1a5
automatically matched to d1dar_2
complexed with gdp, mg; mutant
has additional subdomain(s) that are not in the common domain

Domain for 2bv3:

Domain d2bv3a2: 2bv3 A:7-282 [129238]
Other proteins in same PDB: d2bv3a1, d2bv3a3, d2bv3a4, d2bv3a5
automatically matched to d1dar_2
complexed with gnp, mg; mutant
has additional subdomain(s) that are not in the common domain

Domain for 2efg:
- Domain d2efga2: 2efg A:7-282 [32143]
  Other proteins in same PDB: d2efga1, d2efga3, d2efga4
  complexed with gdp
  has additional subdomain(s) that are not in the common domain

Thermus thermophilus, EF-G-2 [TaxId:274] [142226] (2 PDB entries)
Uniprot Q5SI76 1-267
TTHA1498

Domain for 1wdt:
- Domain d1wdta2: 1wdt A:8-274 [120912]
  Other proteins in same PDB: d1wdta1, d1wdta3, d1wdta4, d1wdta5, d1wdta6
  complexed with gtp, mg
  has additional subdomain(s) that are not in the common domain

Domain for 2dy1:

Domain d2dy1a2: 2dy1 A:8-274 [146608]
Other proteins in same PDB: d2dy1a1, d2dy1a3, d2dy1a4, d2dy1a5, d2dy1a6
automated match to d1wdta2
complexed with gtp, mg
has additional subdomain(s) that are not in the common domain

More info for Protein Elongation factor G (EF-G), N-terminal (G) domain from c.37.1.8: G proteins

Timeline for Protein Elongation factor G (EF-G), N-terminal (G) domain from c.37.1.8: G proteins:

Protein Elongation factor G (EF-G), N-terminal (G) domain from c.37.1.8: G proteins first appeared (with stable ids) in SCOP 1.55
Protein Elongation factor G (EF-G), N-terminal (G) domain from c.37.1.8: G proteins appears in SCOPe 2.07