SCOPe 2.04: Protein: Pyruvate phosphate dikinase, central domain

Lineage for Protein: Pyruvate phosphate dikinase, central domain

Root: SCOPe 2.04
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (10 superfamilies)
3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
this domain is thought to be mobile in most multi-domain proteins known to contain it

Superfamily c.8.1: Phosphohistidine domain [52009] (2 families)
contains barrel, closed, n=7, S=10
Family c.8.1.1: Pyruvate phosphate dikinase, central domain [52010] (1 protein)
Protein Pyruvate phosphate dikinase, central domain [52011] (3 species)

Species:

Clostridium symbiosum [TaxId:1512] [52012] (8 PDB entries)
1. Domain for 1dik:
  - Domain d1dika2: 1dik A:377-505 [30702]
    Other proteins in same PDB: d1dika1, d1dika3
    complexed with so4
2. Domain for 1ggo:
  - Domain d1ggoa2: 1ggo A:377-505 [30703]
    Other proteins in same PDB: d1ggoa1, d1ggoa3
    complexed with so4; mutant
3. Domain for 1jde:
  - Domain d1jdea2: 1jde A:377-504 [66547]
    Other proteins in same PDB: d1jdea1, d1jdea3
    complexed with so4; mutant
4. Domain for 1kbl:
  - Domain d1kbla2: 1kbl A:377-509 [68385]
    Other proteins in same PDB: d1kbla1, d1kbla3
    complexed with nh4, so4
5. Domain for 1kc7:
  - Domain d1kc7a2: 1kc7 A:377-509 [68424]
    Other proteins in same PDB: d1kc7a1, d1kc7a3
    complexed with mg, ppr, so4
6. Domain for 2dik:
  - Domain d2dika2: 2dik A:377-505 [30704]
    Other proteins in same PDB: d2dika1, d2dika3
    complexed with so4; mutant
7. Domain for 2fm4:
  - Domain d2fm4a_: 2fm4 A: [133760]
    automated match to d2fm4a1
8. Domain for 2r82:
  - Domain d2r82a2: 2r82 A:377-509 [151668]
    Other proteins in same PDB: d2r82a1, d2r82a3
    automatically matched to d1kbla2
    complexed with so4; mutant
Maize (Zea mays) [TaxId:4577] [141971] (2 PDB entries)
Uniprot P11155 454-588
1. Domain for 1vbg:
  - Domain d1vbga2: 1vbg A:383-517 [119952]
    Other proteins in same PDB: d1vbga1, d1vbga3
    complexed with mg, so4
2. Domain for 1vbh:
  - Domain d1vbha2: 1vbh A:383-517 [119955]
    Other proteins in same PDB: d1vbha1, d1vbha3
    automated match to d1vbga2
    complexed with mg, pep, so4
Trypanosome (Trypanosoma brucei) [TaxId:5691] [75134] (1 PDB entry)
- Domain for 2x0s:
  - Domain d2x0sa2: 2x0s A:406-537 [169775]
    Other proteins in same PDB: d2x0sa1, d2x0sa3

More info for Protein Pyruvate phosphate dikinase, central domain from c.8.1.1: Pyruvate phosphate dikinase, central domain

Timeline for Protein Pyruvate phosphate dikinase, central domain from c.8.1.1: Pyruvate phosphate dikinase, central domain:

Protein Pyruvate phosphate dikinase, central domain from c.8.1.1: Pyruvate phosphate dikinase, central domain first appeared (with stable ids) in SCOP 1.55
Protein Pyruvate phosphate dikinase, central domain from c.8.1.1: Pyruvate phosphate dikinase, central domain appears in SCOPe 2.03
Protein Pyruvate phosphate dikinase, central domain from c.8.1.1: Pyruvate phosphate dikinase, central domain appears in SCOPe 2.05
Protein Pyruvate phosphate dikinase, central domain from c.8.1.1: Pyruvate phosphate dikinase, central domain appears in the current release, SCOPe 2.08