SCOP 1.69: Family b.36.1.1: PDZ domain

Lineage for Family b.36.1.1: PDZ domain

1. Root: SCOP 1.69

2. Class b: All beta proteins [48724] (144 folds)

3. Fold b.36: PDZ domain-like [50155] (1 superfamily)
   contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix

4. Superfamily b.36.1: PDZ domain-like [50156] (4 families)
   peptide-binding domain

5. Family b.36.1.1: PDZ domain [50157] (29 proteins)
   Pfam 00595

Proteins:

1. Alpha-actinin-2 associated LIM protein [110178] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [110179] (1 PDB entry)

2. Cask/Lin-2 [50160] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [50161] (1 PDB entry)

3. Discs large 5 protein KIAA0583 [101725] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [101726] (1 PDB entry)

4. Discs large protein homolog [50158] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [50159] (1 PDB entry)

5. Erbin [82085] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [82086] (3 PDB entries)

6. Glutamate receptor interacting protein [82083] (2 species)

   1. Species Mouse (Mus musculus) [TaxId:10090] [110177] (1 PDB entry)

   2. Species Rat (Rattus norvegicus) [TaxId:10116] [82084] (3 PDB entries)

7. Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) [110180] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [110181] (1 PDB entry)

8. Glutamate receptor-interacting protein 1, GRIP1 [101717] (1 species)

   • Species Rat (Rattus norvegicus) [TaxId:10116] [101718] (2 PDB entries)

9. GTPase-binding domain of the cell polarity protein par6 (Par-6B) [89315] (2 species)

   1. Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [101716] (2 PDB entries)
      Cg5884-pa

   2. Species Mouse (Mus musculus) [TaxId:10090] [89316] (1 PDB entry)

10. Harmonin [110182] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [110183] (1 PDB entry)

11. Hypothetical protein KIAA0559 [101727] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101728] (1 PDB entry)

12. Hypothetical protein KIAA1095 [101723] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101724] (1 PDB entry)

13. Hypothetical protein KIAA1849 [101729] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101730] (1 PDB entry)

14. Inad [63756] (1 species)

    • Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [63757] (1 PDB entry)

15. KIAA1526 protein [101721] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101722] (3 PDB entries)

16. Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) [101719] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101720] (4 PDB entries)

17. Na+/H+ exchanger regulatory factor, NHERF [63754] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [63755] (4 PDB entries)

18. Neuronal nitric oxide synthase, NNOS [50166] (1 species)

    • Species Rat (Rattus norvegicus) [TaxId:10116] [50167] (3 PDB entries)

19. PDZ-LIM protein mystique [110186] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [110187] (1 PDB entry)

20. Phosphatase hPTP1e [50168] (2 species)

    1. Species Human (Homo sapiens) [TaxId:9606] [50169] (3 PDB entries)

    2. Species Mouse (Mus musculus) [TaxId:10090] [74930] (2 PDB entries)

21. Rhophilin-2 [110184] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [110185] (1 PDB entry)

22. Scribble (KIAA0147) [101731] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101732] (1 PDB entry)

23. Segment polarity protein dishevelled homolog Dvl-2 [89313] (2 species)

    1. Species African clawed frog (Xenopus laevis) [TaxId:8355] [89314] (1 PDB entry)

    2. Species Mouse (Mus musculus) [TaxId:10090] [101715] (1 PDB entry)

24. Shank1, PDZ domain [101733] (1 species)
    SH3 and multiple ankyrin repeat domains protein 1

    • Species Rat (Rattus norvegicus) [TaxId:10116] [101734] (2 PDB entries)

25. Synapse-associated protein 102 [101713] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101714] (1 PDB entry)

26. Synaptic protein PSD-95 [50162] (2 species)
    Synonym: synapse associated protein 90, sap90
    duplication: contains three PDZ domains

    1. Species Human (Homo sapiens) [TaxId:9606] [74932] (1 PDB entry)

    2. Species Rat (Rattus norvegicus) [TaxId:10116] [50163] (6 PDB entries)

27. Syntenin 1 [89311] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [89312] (6 PDB entries)

28. Syntrophin [50164] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [50165] (2 PDB entries)

29. Zasp, PDZ domain [101735] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [101736] (1 PDB entry)

More info for Family b.36.1.1: PDZ domain

Timeline for Family b.36.1.1: PDZ domain:

• Family b.36.1.1: PDZ domain first appeared (with stable ids) in SCOP 1.55
  
• Family b.36.1.1: PDZ domain appears in SCOP 1.67
  
• Family b.36.1.1: PDZ domain appears in SCOP 1.71
  
• Family b.36.1.1: PDZ domain appears in the current release, SCOPe 2.08