SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family b.6.1.3: Multidomain cupredoxins

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2036241Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 2036242Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 2036937Family b.6.1.3: Multidomain cupredoxins [49550] (8 protein domains)

Protein Domains:

  1. 2036938Ascorbate oxidase [49555] (1 species)
    consists of three domains of this fold
  2. Ceruloplasmin [49559] (1 species)
    consists of 6 domains of this fold
  3. 2036972Coagulation factor V [110103] (1 species)
  4. 2036978Laccase [49557] (5 species)
    consists of three domains of this fold
    1. 2036979Species Fungus (Melanocarpus albomyces) [TaxId:204285] [74873] (9 PDB entries)
    2. 2037034Species Inky cap fungus (Coprinus cinereus) [TaxId:5346] [49558] (2 PDB entries)
    3. 2037041Species Rigidoporus lignosus [TaxId:219653] [110102] (1 PDB entry)
      Uniprot Q6H9H7 22-515
    4. 2037045Species Trametes versicolor, laccase 1 [TaxId:5325] [74871] (1 PDB entry)
    5. 2037058Species Trametes versicolor, laccase 2 [TaxId:5325] [74872] (1 PDB entry)
  5. 2037062multi-copper oxidase CueO [69194] (1 species)
  6. 2037154Nitrite reductase, NIR [49551] (5 species)
    consists of two domains of this fold
    1. 2037155Species Achromobacter cycloclastes [TaxId:223] [49552] (21 PDB entries)
    2. 2037202Species Alcaligenes faecalis, strain s-6 [TaxId:511] [49553] (31 PDB entries)
      Uniprot P38501
    3. 2037373Species Alcaligenes xylosoxidans [TaxId:85698] [49554] (24 PDB entries)
      Uniprot O68601 25-360 ! Uniprot O68601 26-359 ! Uniprot O68601
    4. 2037452Species Neisseria gonorrhoeae, AniA [TaxId:485] [69193] (2 PDB entries)
    5. 2037477Species Rhodobacter sphaeroides [TaxId:1063] [110101] (8 PDB entries)
      Uniprot Q53239
  7. 2037498Spore coat protein A, CotA [89219] (2 species)
    1. 2037499Species Bacillus subtilis [TaxId:1423] [89220] (13 PDB entries)
      Uniprot P07788
    2. 2037539Species Bacillus subtilis [TaxId:224308] [271928] (4 PDB entries)
  8. 2037552automated matches [226877] (4 species)
    not a true protein
    1. 2037553Species Achromobacter cycloclastes [TaxId:223] [274677] (1 PDB entry)
    2. 2037555Species Achromobacter xylosoxidans [TaxId:85698] [225099] (11 PDB entries)
    3. 2037612Species Alcaligenes xylosoxydans [TaxId:85698] [225578] (4 PDB entries)
    4. 2285996Species Neisseria gonorrhoeae [TaxId:242231] [329297] (2 PDB entries)

More info for Family b.6.1.3: Multidomain cupredoxins

Timeline for Family b.6.1.3: Multidomain cupredoxins: