SCOPe 2.07: Protein: Hyaluronate lyase

Lineage for Protein: Hyaluronate lyase

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)

Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

Superfamily a.102.3: Chondroitin AC/alginate lyase [48230] (2 families)
incomplete toroid
Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain [48234] (5 proteins)
Protein Hyaluronate lyase [48237] (2 species)

Species:

Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [48238] (18 PDB entries)
Uniprot Q54873 287-1007
1. Domain for 1c82:
  - Domain d1c82a1: 1c82 A:171-540 [59079]
    Other proteins in same PDB: d1c82a2, d1c82a3
    complexed with cac, na
2. Domain for 1egu:
  - Domain d1egua1: 1egu A:171-540 [18850]
    Other proteins in same PDB: d1egua2, d1egua3, d1egua4
    complexed with so4
3. Domain for 1f9g:
  - Domain d1f9ga1: 1f9g A:170-540 [59738]
    Other proteins in same PDB: d1f9ga2, d1f9ga3
    complexed with asc
4. Domain for 1loh:
  - Domain d1loha1: 1loh A:170-540 [74147]
    Other proteins in same PDB: d1loha2, d1loha3
5. Domain for 1lxk:
  - Domain d1lxka1: 1lxk A:171-540 [74331]
    Other proteins in same PDB: d1lxka2, d1lxka3
6. Domain for 1n7n:
  - Domain d1n7na1: 1n7n A:170-540 [80256]
    Other proteins in same PDB: d1n7na2, d1n7na3
    mutant
7. Domain for 1n7o:
  - Domain d1n7oa1: 1n7o A:170-540 [80259]
    Other proteins in same PDB: d1n7oa2, d1n7oa3
    mutant
8. Domain for 1n7p:
  - Domain d1n7pa1: 1n7p A:170-540 [80262]
    Other proteins in same PDB: d1n7pa2, d1n7pa3
    mutant
9. Domain for 1n7q:
  - Domain d1n7qa1: 1n7q A:170-540 [80265]
    Other proteins in same PDB: d1n7qa2, d1n7qa3
    complexed with bdp, gtr, nag; mutant
10. Domain for 1n7r:
  - Domain d1n7ra1: 1n7r A:170-540 [80268]
    Other proteins in same PDB: d1n7ra2, d1n7ra3
    complexed with bdp, nag; mutant
11. Domain for 1ojm:
  - Domain d1ojma1: 1ojm A:174-540 [93134]
    Other proteins in same PDB: d1ojma2, d1ojma3, d1ojma4
    complexed with so4
12. Domain for 1ojn:
  - Domain d1ojna1: 1ojn A:170-540 [93137]
    Other proteins in same PDB: d1ojna2, d1ojna3
    complexed with so4; mutant
13. Domain for 1ojo:
  - Domain d1ojoa1: 1ojo A:170-540 [93140]
    Other proteins in same PDB: d1ojoa2, d1ojoa3
    complexed with so4; mutant
14. Domain for 1ojp:
  - Domain d1ojpa1: 1ojp A:170-540 [93143]
    Other proteins in same PDB: d1ojpa2, d1ojpa3
    complexed with so4
15. Domain for 1w3y:
  - Domain d1w3ya1: 1w3y A:170-540 [109168]
    Other proteins in same PDB: d1w3ya2, d1w3ya3
    complexed with pvc, so4, xyl
16. Domain for 2brp:
  - Domain d2brpa1: 2brp A:170-540 [129005]
    Other proteins in same PDB: d2brpa2, d2brpa3
    automated match to d1w3ya1
    complexed with sie, so4, xls
17. Domain for 2brv:
  - Domain d2brvx1: 2brv X:170-540 [129019]
    Other proteins in same PDB: d2brvx2, d2brvx3
    automatically matched to d1f9ga1
    complexed with mla
18. Domains for 2brw:
  1. Domain d2brwa1: 2brw A:172-540 [129022]
    Other proteins in same PDB: d2brwa2, d2brwa3, d2brwa4, d2brwb2, d2brwb3, d2brwb4
    automated match to d1ojpa1
    complexed with so4
  2. Domain d2brwb1: 2brw B:172-540 [129025]
    Other proteins in same PDB: d2brwa2, d2brwa3, d2brwa4, d2brwb2, d2brwb3, d2brwb4
    automated match to d1ojpa1
    complexed with so4
Streptococcus agalactiae [TaxId:1311] [69089] (3 PDB entries)
preceded by a small all-beta Ig-like domain
1. Domain for 1f1s:
  - Domain d1f1sa1: 1f1s A:249-619 [64928]
    Other proteins in same PDB: d1f1sa2, d1f1sa3, d1f1sa4
2. Domain for 1i8q:
  - Domain d1i8qa1: 1i8q A:249-619 [66090]
    Other proteins in same PDB: d1i8qa2, d1i8qa3, d1i8qa4
3. Domain for 1lxm:
  - Domain d1lxma1: 1lxm A:249-619 [78296]
    Other proteins in same PDB: d1lxma2, d1lxma3, d1lxma4

More info for Protein Hyaluronate lyase from a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain

Timeline for Protein Hyaluronate lyase from a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain:

Protein Hyaluronate lyase from a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Protein Hyaluronate lyase from a.102.3.2: Hyaluronate lyase-like, N-terminal domain
Protein Hyaluronate lyase from a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain appears in SCOPe 2.06
Protein Hyaluronate lyase from a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain appears in the current release, SCOPe 2.08