Lineage for Family a.22.1.3: TBP-associated factors, TAFs

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2310256Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 2310257Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 2311035Family a.22.1.3: TBP-associated factors, TAFs [47134] (14 protein domains)

Protein Domains:

  1. 2311036Chrac-14 [140398] (1 species)
  2. 2311042Chrac-16 [140400] (1 species)
  3. 2311048Histone domain of Son of sevenless protein [101107] (1 species)
  4. 2311059Negative cofactor 2, NC2, alpha chain [63507] (1 species)
  5. 2311062Negative cofactor 2, NC2, beta chain [63509] (1 species)
  6. 2311065Nuclear transcription factor Y subunit beta (Nf-Yb3) [81724] (1 species)
    forms a heterodimer with Nf-Yc2 similar to H2A/H2B
  7. 2311068Nuclear transcription factor Y subunit gamma (Nf-Yc2) [81726] (1 species)
    forms a heterodimer with Nf-Yb3 similar to H2A/H2B
  8. 2311071TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain [81720] (1 species)
    lacks the third helix, forms a heterodimer with TAF(II)-20 similar to H2A-H2B
  9. 2311075TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain [81722] (1 species)
    forms a heterodimer with TAF(II)-135 similar to H2A-H2B
  10. 2311079TAF(II)18 [47139] (1 species)
  11. 2311083TAF(II)28 [47141] (1 species)
  12. 2311087TAF(II)42 [47135] (1 species)
    TAFii42 and TAFii62 form heterotetramer similar to (H3-H4)2
  13. 2311090TAF(II)62 [47137] (1 species)
    TAFii42 and TAFii62 form heterotetramer similar to (H3-H4)2
  14. 2311093automated matches [194413] (3 species)
    not a true protein
    1. 2311094Species Aspergillus nidulans [TaxId:227321] [194414] (2 PDB entries)
    2. 2311097Species Human (Homo sapiens) [TaxId:9606] [270229] (1 PDB entry)
    3. 2311100Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [326898] (1 PDB entry)

More info for Family a.22.1.3: TBP-associated factors, TAFs

Timeline for Family a.22.1.3: TBP-associated factors, TAFs: