SCOP 1.71: Domain d1bmda2: 1bmd A:155-332

Lineage for d1bmda2 (1bmd A:155-332)

1. Root: SCOP 1.71

2. Class d: Alpha and beta proteins (a+b) [53931] (286 folds)

3. Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
   unusual fold, defines family

4. Superfamily d.162.1: LDH C-terminal domain-like [56327] (2 families)

5. Family d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain [56328] (4 proteins)
   N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain)

6. Protein Malate dehydrogenase [56329] (11 species)

7. Species Thermus flavus [TaxId:274] [56334] (2 PDB entries)

8. Domain d1bmda2: 1bmd A:155-332 [42106]
   Other proteins in same PDB: d1bmda1, d1bmdb1

Details for d1bmda2

PDB Entry: 1bmd, 1.9 Å

PDB Description: determinants of protein thermostability observed in the 1.9 angstroms crystal structure of malate dehydrogenase from the thermophilic bacterium thermus flavus

SCOP Domain Sequences for d1bmda2:

Sequence; same for both SEQRES and ATOM records:

>d1bmda2 d.162.1.1 (A:155-332) Malate dehydrogenase {Thermus flavus}
trldhnrakaqlakktgtgvdrirrmtvwgnhsstmfpdlfhaevdgrpalelvdmewye
kvfiptvaqrgaaiiqargassaasaanaaiehirdwalgtpegdwvsmavpsqgeygip
egivysfpvtakdgayrvvegleinefarkrmeitaqelldemeqvkalgli

Timeline for d1bmda2:

• d1bmda2 first appeared (with stable ids) in SCOP 1.55
  
• d1bmda2 appears in SCOP 1.69
  
• d1bmda2 appears in SCOP 1.73
  
• d1bmda2 appears in the current release, SCOPe 2.08