Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2870646Family c.37.1.19: Tandem AAA-ATPase domain [81268] (41 proteins)
    duplication: tandem repeat of two RecA-like (AAA) domains
  6. 2870881Protein Transcription-repair coupling factor TRCF, domain 1 [418974] (1 species)
    entire protein is similar to UvrB in the N-terminal part and DEAD helicases in the C-terminal part; also contains CarD-like domain in the middle and TRCF domain at the C-terminus
  7. 2870882Species Escherichia coli [TaxId:562] [419438] (2 PDB entries)
    Uniprot P30958

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 2b2n:
    1. 2870883Domain d2b2na1: 2b2n A:26-333 [127710]
      Other proteins in same PDB: d2b2nb3
      N-terminal domain only
      complexed with na, p4c, so4
      has additional subdomain(s) that are not in the common domain
    2. 2870884Domain d2b2nb2: 2b2n B:26-333 [127711]
      Other proteins in same PDB: d2b2nb3
      automated match to d2b2na1
      complexed with na, p4c, so4
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 2eyq:
    1. 2870885Domain d2eyqa4: 2eyq A:2-348 [132593]
      Other proteins in same PDB: d2eyqa1, d2eyqa2, d2eyqa3, d2eyqa5, d2eyqa6, d2eyqb1, d2eyqb2, d2eyqb3, d2eyqb5, d2eyqb6
      complexed with epe, so4
      has additional subdomain(s) that are not in the common domain
    2. 2870886Domain d2eyqb4: 2eyq B:5-348 [132599]
      Other proteins in same PDB: d2eyqa1, d2eyqa2, d2eyqa3, d2eyqa5, d2eyqa6, d2eyqb1, d2eyqb2, d2eyqb3, d2eyqb5, d2eyqb6
      automatically matched to 2EYQ A:2-348
      complexed with epe, so4
      has additional subdomain(s) that are not in the common domain

More info for Species Escherichia coli [TaxId:562] from c.37.1.19 Transcription-repair coupling factor TRCF, domain 1

Timeline for Species Escherichia coli [TaxId:562] from c.37.1.19 Transcription-repair coupling factor TRCF, domain 1:

  • Species Escherichia coli [TaxId:562] from c.37.1.19 Transcription-repair coupling factor TRCF, domain 1 is new in SCOPe 2.08-stable