SCOPe 2.08: Protein: Elongation factor 2 (eEF-2), N-terminal domain

Lineage for Protein: Elongation factor 2 (eEF-2), N-terminal domain

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamily d.58.11: EF-G C-terminal domain-like [54980] (4 families)
Family d.58.11.1: EF-G/eEF-2 domains III and V [54981] (5 proteins)
domain III structure is lacking some of the superfamily characters and is often disordered in crystals
Protein Elongation factor 2 (eEF-2), N-terminal domain [419042] (2 species)

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [419527] (13 PDB entries)
Uniprot P32324

Domain for 1n0u:
- Domain d1n0ua4: 1n0u A:482-560 [79760]
  Other proteins in same PDB: d1n0ua1, d1n0ua2, d1n0ua3, d1n0ua5
  complexed with so1
Domains for 1n0v:
1. Domain d1n0vc4: 1n0v C:482-560 [79765]
  Other proteins in same PDB: d1n0vc1, d1n0vc2, d1n0vc3, d1n0vc5, d1n0vd1, d1n0vd2, d1n0vd3, d1n0vd5
2. Domain d1n0vd4: 1n0v D:482-560 [79770]
  Other proteins in same PDB: d1n0vc1, d1n0vc2, d1n0vc3, d1n0vc5, d1n0vd1, d1n0vd2, d1n0vd3, d1n0vd5
Domain for 1u2r:
- Domain d1u2ra4: 1u2r A:482-560 [107620]
  Other proteins in same PDB: d1u2ra1, d1u2ra2, d1u2ra3, d1u2ra5
  complexed with apr, gdp, mg, so1

Domains for 1zm4:

Domain d1zm4a4: 1zm4 A:482-560 [125319]
Other proteins in same PDB: d1zm4a1, d1zm4a2, d1zm4a3, d1zm4a5, d1zm4b_, d1zm4c1, d1zm4c2, d1zm4c3, d1zm4c5, d1zm4d_, d1zm4e1, d1zm4e2, d1zm4e3, d1zm4e5, d1zm4f_
automated match to d1n0vc4
complexed with tad

Domain d1zm4c4: 1zm4 C:482-560 [125325]
Other proteins in same PDB: d1zm4a1, d1zm4a2, d1zm4a3, d1zm4a5, d1zm4b_, d1zm4c1, d1zm4c2, d1zm4c3, d1zm4c5, d1zm4d_, d1zm4e1, d1zm4e2, d1zm4e3, d1zm4e5, d1zm4f_
automated match to d1n0vc4
complexed with tad

Domain d1zm4e4: 1zm4 E:482-560 [125331]
Other proteins in same PDB: d1zm4a1, d1zm4a2, d1zm4a3, d1zm4a5, d1zm4b_, d1zm4c1, d1zm4c2, d1zm4c3, d1zm4c5, d1zm4d_, d1zm4e1, d1zm4e2, d1zm4e3, d1zm4e5, d1zm4f_
automated match to d1n0vc4
complexed with tad

Domains for 1zm9:

Domain d1zm9a4: 1zm9 A:482-560 [125339]
Other proteins in same PDB: d1zm9a1, d1zm9a2, d1zm9a3, d1zm9a5, d1zm9b_, d1zm9c1, d1zm9c2, d1zm9c3, d1zm9c5, d1zm9d_, d1zm9e1, d1zm9e2, d1zm9e3, d1zm9e5, d1zm9f_
automated match to d1n0vc4
complexed with p34

Domain d1zm9c4: 1zm9 C:482-560 [125345]
Other proteins in same PDB: d1zm9a1, d1zm9a2, d1zm9a3, d1zm9a5, d1zm9b_, d1zm9c1, d1zm9c2, d1zm9c3, d1zm9c5, d1zm9d_, d1zm9e1, d1zm9e2, d1zm9e3, d1zm9e5, d1zm9f_
automated match to d1n0vc4
complexed with p34

Domain d1zm9e4: 1zm9 E:482-560 [125351]
Other proteins in same PDB: d1zm9a1, d1zm9a2, d1zm9a3, d1zm9a5, d1zm9b_, d1zm9c1, d1zm9c2, d1zm9c3, d1zm9c5, d1zm9d_, d1zm9e1, d1zm9e2, d1zm9e3, d1zm9e5, d1zm9f_
automated match to d1n0vc4
complexed with p34

Domains for 2npf:
1. Domain d2npfa4: 2npf A:482-560 [138435]
  Other proteins in same PDB: d2npfa1, d2npfa2, d2npfa3, d2npfa5, d2npfb1, d2npfb2, d2npfb3, d2npfb5
  automated match to d1n0ua4
  complexed with gdp, mou
2. Domain d2npfb4: 2npf B:482-560 [138440]
  Other proteins in same PDB: d2npfa1, d2npfa2, d2npfa3, d2npfa5, d2npfb1, d2npfb2, d2npfb3, d2npfb5
  automated match to d1n0ua4
  complexed with gdp, mou
Domain for 2p8w:
- Domain d2p8wt4: 2p8w T:482-560 [139539]
  Other proteins in same PDB: d2p8wt1, d2p8wt2, d2p8wt3, d2p8wt5
  automatically matched to d1n0ua4
  complexed with gnp
Domain for 2p8x:
- Domain d2p8xt4: 2p8x T:482-560 [139544]
  Other proteins in same PDB: d2p8xt1, d2p8xt2, d2p8xt3, d2p8xt5
  automatically matched to d1n0ua4
  complexed with apr, gnp
Domain for 2p8y:
- Domain d2p8yt4: 2p8y T:482-560 [139549]
  Other proteins in same PDB: d2p8yt1, d2p8yt2, d2p8yt3, d2p8yt5
  automatically matched to d1n0ua4
  complexed with apr, gdp, so1
Domain for 2p8z:
- Domain d2p8zt4: 2p8z T:482-560 [139554]
  Other proteins in same PDB: d2p8zt1, d2p8zt2, d2p8zt3, d2p8zt5
  automatically matched to d1n0ua4
  complexed with apr, gnp, so1

Domains for 3b78:

Domain d3b78a3: 3b78 A:482-560 [199032]
Other proteins in same PDB: d3b78a1, d3b78a2, d3b78a4, d3b78a5, d3b78b1, d3b78b2, d3b78c1, d3b78c2, d3b78c4, d3b78c5, d3b78d1, d3b78d2, d3b78e1, d3b78e2, d3b78e4, d3b78e5, d3b78f1, d3b78f2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domain d3b78c3: 3b78 C:482-560 [199037]
Other proteins in same PDB: d3b78a1, d3b78a2, d3b78a4, d3b78a5, d3b78b1, d3b78b2, d3b78c1, d3b78c2, d3b78c4, d3b78c5, d3b78d1, d3b78d2, d3b78e1, d3b78e2, d3b78e4, d3b78e5, d3b78f1, d3b78f2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domain d3b78e3: 3b78 E:482-560 [199042]
Other proteins in same PDB: d3b78a1, d3b78a2, d3b78a4, d3b78a5, d3b78b1, d3b78b2, d3b78c1, d3b78c2, d3b78c4, d3b78c5, d3b78d1, d3b78d2, d3b78e1, d3b78e2, d3b78e4, d3b78e5, d3b78f1, d3b78f2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domains for 3b82:

Domain d3b82a3: 3b82 A:482-560 [199047]
Other proteins in same PDB: d3b82a1, d3b82a2, d3b82a4, d3b82a5, d3b82b1, d3b82b2, d3b82c1, d3b82c2, d3b82c4, d3b82c5, d3b82d1, d3b82d2, d3b82e1, d3b82e2, d3b82e4, d3b82e5, d3b82f1, d3b82f2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domain d3b82c3: 3b82 C:482-560 [199052]
Other proteins in same PDB: d3b82a1, d3b82a2, d3b82a4, d3b82a5, d3b82b1, d3b82b2, d3b82c1, d3b82c2, d3b82c4, d3b82c5, d3b82d1, d3b82d2, d3b82e1, d3b82e2, d3b82e4, d3b82e5, d3b82f1, d3b82f2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domain d3b82e3: 3b82 E:482-560 [199057]
Other proteins in same PDB: d3b82a1, d3b82a2, d3b82a4, d3b82a5, d3b82b1, d3b82b2, d3b82c1, d3b82c2, d3b82c4, d3b82c5, d3b82d1, d3b82d2, d3b82e1, d3b82e2, d3b82e4, d3b82e5, d3b82f1, d3b82f2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domains for 3b8h:

Domain d3b8ha3: 3b8h A:482-560 [199062]
Other proteins in same PDB: d3b8ha1, d3b8ha2, d3b8ha4, d3b8ha5, d3b8hb1, d3b8hb2, d3b8hc1, d3b8hc2, d3b8hc4, d3b8hc5, d3b8hd1, d3b8hd2, d3b8he1, d3b8he2, d3b8he4, d3b8he5, d3b8hf1, d3b8hf2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domain d3b8hc3: 3b8h C:482-560 [199067]
Other proteins in same PDB: d3b8ha1, d3b8ha2, d3b8ha4, d3b8ha5, d3b8hb1, d3b8hb2, d3b8hc1, d3b8hc2, d3b8hc4, d3b8hc5, d3b8hd1, d3b8hd2, d3b8he1, d3b8he2, d3b8he4, d3b8he5, d3b8hf1, d3b8hf2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Domain d3b8he3: 3b8h E:482-560 [199072]
Other proteins in same PDB: d3b8ha1, d3b8ha2, d3b8ha4, d3b8ha5, d3b8hb1, d3b8hb2, d3b8hc1, d3b8hc2, d3b8hc4, d3b8hc5, d3b8hd1, d3b8hd2, d3b8he1, d3b8he2, d3b8he4, d3b8he5, d3b8hf1, d3b8hf2
automated match to d1n0vc4
protein/RNA complex; complexed with nad

Human (Homo sapiens) [TaxId:9606] [419529] (1 PDB entry)
- Domain for 3j3a:
  - Domain d3j3az3: 3j3a z:498-576 [264917]
    Other proteins in same PDB: d3j3aa_, d3j3ab_, d3j3ac_, d3j3ad_, d3j3ae_, d3j3af_, d3j3ag_, d3j3az1, d3j3az2, d3j3az4, d3j3az5

More info for Protein Elongation factor 2 (eEF-2), N-terminal domain from d.58.11.1: EF-G/eEF-2 domains III and V

Timeline for Protein Elongation factor 2 (eEF-2), N-terminal domain from d.58.11.1: EF-G/eEF-2 domains III and V:

Protein Elongation factor 2 (eEF-2), N-terminal domain from d.58.11.1: EF-G/eEF-2 domains III and V is new in SCOPe 2.08-stable