Lineage for d6y4nf2 (6y4n F:77-378)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2585054Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2585055Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2585417Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
    Pfam PF03133; PubMed 22020298
  6. 2585418Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)
  7. 2585419Species Chicken (Gallus gallus) [TaxId:9031] [311385] (158 PDB entries)
  8. 2585521Domain d6y4nf2: 6y4n F:77-378 [402824]
    Other proteins in same PDB: d6y4na1, d6y4na2, d6y4nb1, d6y4nb2, d6y4nc1, d6y4nc2, d6y4nd1, d6y4nd2, d6y4ne_, d6y4nf1, d6y4nf3
    automated match to d3tiia2
    complexed with acp, ca, gdp, gtp, mes, mg, o9b, o9k, o9n, p6s, peg, pge, val

Details for d6y4nf2

PDB Entry: 6y4n (more details), 2.85 Å

PDB Description: structure of tubulin tyrosine ligase in complex with tb116
PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d6y4nf2:

Sequence, based on SEQRES records: (download)

>d6y4nf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records): (download)

>d6y4nf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptntderevflaaynrrregregnvwiakegilis
seaselldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvlrt
ssepynsanfqdktchltnhciqkeysknygryeegnemffeefnqylmdalnttlensi
llqikhiirsclmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqkly
aelcqgivdvaissvfpladtsifikl

SCOPe Domain Coordinates for d6y4nf2:

Click to download the PDB-style file with coordinates for d6y4nf2.
(The format of our PDB-style files is described here.)

Timeline for d6y4nf2: