Lineage for d5ruja_ (5ruj A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2489006Fold c.50: Macro domain-like [52948] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 6 strands, order 165243, strand 3 is antiparallel to the rest
  4. 2489007Superfamily c.50.1: Macro domain-like [52949] (4 families) (S)
  5. 2489032Family c.50.1.2: Macro domain [89724] (7 proteins)
    found in different proteins, including macro-H2a histone and the Appr-1"-p processing enzyme
  6. 2489075Protein automated matches [190472] (8 species)
    not a true protein
  7. 2489130Species SARS coronavirus [TaxId:227859] [187695] (257 PDB entries)
  8. 2489331Domain d5ruja_: 5ruj A: [397428]
    Other proteins in same PDB: d5rujb2
    automated match to d2favb_
    complexed with 2sx

Details for d5ruja_

PDB Entry: 5ruj (more details), 1.01 Å

PDB Description: pandda analysis group deposition -- crystal structure of sars-cov-2 nsp3 macrodomain in complex with zinc000000404314
PDB Compounds: (A:) non-structural protein 3

SCOPe Domain Sequences for d5ruja_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ruja_ c.50.1.2 (A:) automated matches {SARS coronavirus [TaxId: 227859]}
vnsfsgylkltdnvyiknadiveeakkvkptvvvnaanvylkhgggvagalnkatnnamq
vesddyiatngplkvggscvlsghnlakhclhvvgpnvnkgediqllksayenfnqhevl
lapllsagifgadpihslrvcvdtvrtnvylavfdknlydklvssfl

SCOPe Domain Coordinates for d5ruja_:

Click to download the PDB-style file with coordinates for d5ruja_.
(The format of our PDB-style files is described here.)

Timeline for d5ruja_: