SCOPe 2.07: Domain d6uodb_: 6uod B:

Lineage for d6uodb_ (6uod B:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
   consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
   Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
   Domain 2 has parallel beta-sheet of 4 strands, order 1234

4. Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families)

5. Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
   automatically mapped to Pfam PF00710

6. Protein Asparaginase type II [53776] (5 species)

7. Species Escherichia coli [TaxId:562] [53777] (40 PDB entries)

8. Domain d6uodb_: 6uod B: [392361]
   automated match to d1nnsa_

Details for d6uodb_

PDB Entry: 6uod, 2.4 Å

PDB Description: asparaginase ii from escherichia coli

PDB Compounds: (B:) L-asparaginase 2

SCOPe Domain Sequences for d6uodb_:

Sequence, based on SEQRES records:

>d6uodb_ c.88.1.1 (B:) Asparaginase type II {Escherichia coli [TaxId: 562]}
lpnitilatggtiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeqvvnigsqd
mndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmvgamrpsts
msadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtktnttdvatfksvnygplg
yihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalvdagydgiv
sagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfvasgtlnpq
karvllqlaltqtkdpqqiqqifnqy

Sequence, based on observed residues (ATOM records):

>d6uodb_ c.88.1.1 (B:) Asparaginase type II {Escherichia coli [TaxId: 562]}
lpnitilatggtiagenlvnavpqlkdianvkgeqvvnigsqdmndnvwltlakkintdc
dktdgfvithgtdtmeetayfldltvkcdkpvvmvgamrpstsmsadgpfnlynavvtaa
dkasanrgvlvvmndtvldgrdvtktnttdvatfksvnygplgyihngkidyqrtparkh
tsdtpfdvsklnelpkvgivynyanasdlpakalvdagydgivsagvgngnlyksvfdtl
ataaktgtavvrssrvptgattqdaevddakygfvasgtlnpqkarvllqlaltqtkdpq
qiqqifnqy

Timeline for d6uodb_:

• d6uodb_ is new in SCOPe 2.07-stable
  
• d6uodb_ appears in the current release, SCOPe 2.08