SCOPe 2.07: Domain d6syna2: 6syn A:234-566

Lineage for d6syna2 (6syn A:234-566)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.0: automated matches [191512] (1 protein)
   not a true family

6. Protein automated matches [190857] (70 species)
   not a true protein

7. Species Yersinia pestis [TaxId:632] [391973] (1 PDB entry)

8. Domain d6syna2: 6syn A:234-566 [391974]
   Other proteins in same PDB: d6syna1
   automated match to d3eqva2
   complexed with act, cb9

Details for d6syna2

PDB Entry: 6syn, 2.63 Å

PDB Description: crystal structure of y. pestis penicillin-binding protein 3

PDB Compounds: (A:) Peptidoglycan D,D-transpeptidase FtsI

SCOPe Domain Sequences for d6syna2:

Sequence, based on SEQRES records:

>d6syna2 e.3.1.0 (A:234-566) automated matches {Yersinia pestis [TaxId: 632]}
svderlqalvyrelnnavafnkaesgtavlvdvntgevlamanspsynpnnltgtpkdam
rnraitdifepgstvkpmvvmtalqhgvvkensvlntlpyfvnghqikdvaryaelsvtg
ilqkssnvgvsklalampssalvdtysrfgfgkatnlglvgessglypkkqrwsdierat
fsfgyglmvtplqlarvyatigsmgvyrplsitrvdppvagerifpeplvrtvvhmmesv
alpggggtkaaikgyriaiktgtakkvgpdgkymdrylaytagvapasnprfalvvvind
pqagkyyggavsapvfgaimggvlrtmniepda

Sequence, based on observed residues (ATOM records):

>d6syna2 e.3.1.0 (A:234-566) automated matches {Yersinia pestis [TaxId: 632]}
svderlqalvyrelnnavafnkaesgtavlvdvntgevlamanspsynpnnltamrnrai
tdifepgstvkpmvvmtalqhgvvkensvlntlpyfvnghqikdvaryaelsvtgilqks
snvgvsklalampssalvdtysrfgfgkatnlglvgessglypkkqrwsdieratfsfgy
glmvtplqlarvyatigsmgvyrplsitrvdppvagerifpeplvrtvvhmmesvalpgg
ggtkaaikgyriaiktgtakkvgpdgkymdrylaytagvapasnprfalvvvindpqagk
yyggavsapvfgaimggvlrtmniepda

Timeline for d6syna2:

• d6syna2 is new in SCOPe 2.07-stable
  
• d6syna2 appears in the current release, SCOPe 2.08