SCOPe 2.07: Domain d6t5md_: 6t5m D:

Lineage for d6t5md_ (6t5m D:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families)

5. Family c.1.12.7: Phosphoenolpyruvate mutase/Isocitrate lyase-like [88704] (4 proteins)
   forms a swapped dimer

6. Protein automated matches [190974] (7 species)
   not a true protein

7. Species Pseudomonas aeruginosa [TaxId:208964] [391754] (2 PDB entries)

8. Domain d6t5md_: 6t5m D: [391849]
   automated match to d3eooi_
   complexed with mg, pyr

Details for d6t5md_

PDB Entry: 6t5m, 1.76 Å

PDB Description: crystal structure of 2-methylisocitrate lyase (prpb) from pseudomonas aeruginosa in complex with mg(ii)-pyruvate.

PDB Compounds: (D:) 2-methylisocitrate lyase

SCOPe Domain Sequences for d6t5md_:

Sequence, based on SEQRES records:

>d6t5md_ c.1.12.7 (D:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
ltpgqrfreavatehplqvvgtinanhallakragfkaiylsgggvaagslglpdlgisg
lddvltdvrritdvcdlpllvdvdtgfgssafnvartvksmikfgaaamhiedqvgakrc
ghrpnkeivsqqemvdrikaavdarsddsfvimartdalaveglqaaidracacveagad
mifpeamtelamykefaaavkvpvlanitefgatplfttdelasadvslvlyplsafram
nkaaenvytairrdgtqknvidtmqtrmelydridyhsfeqkldalf

Sequence, based on observed residues (ATOM records):

>d6t5md_ c.1.12.7 (D:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
ltpgqrfreavatehplqvvgtinanhallakragfkaiylsgggvaagslglpdlgisg
lddvltdvrritdvcdlpllvdvdtgfgssafnvartvksmikfgaaamhiedqveivsq
qemvdrikaavdarsddsfvimartdalaveglqaaidracacveagadmifpeamtela
mykefaaavkvpvlanitefgatplfttdelasadvslvlyplsaframnkaaenvytai
rrdgtqknvidtmqtrmelydridyhsfeqkldalf

Timeline for d6t5md_:

• d6t5md_ is new in SCOPe 2.07-stable
  
• d6t5md_ appears in the current release, SCOPe 2.08