Lineage for d6w0gb1 (6w0g B:1-107)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2740696Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2741585Species Norway rat (Rattus norvegicus) [TaxId:10116] [88532] (14 PDB entries)
  8. 2741597Domain d6w0gb1: 6w0g B:1-107 [389177]
    Other proteins in same PDB: d6w0ga1, d6w0ga2, d6w0gb2, d6w0gc_
    automated match to d1r3ja1
    complexed with k

Details for d6w0gb1

PDB Entry: 6w0g (more details), 2.6 Å

PDB Description: closed-gate kcsa soaked in 1mm kcl/5mm bacl2
PDB Compounds: (B:) Fab light chain

SCOPe Domain Sequences for d6w0gb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6w0gb1 b.1.1.1 (B:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Norway rat (Rattus norvegicus) [TaxId: 10116]}
dilltqspailsvspgervsfscrasqsigtdihwyqqrtngsprllikyasesisgips
rfsgsgsgtdftlsinsvesedianyycqqsnrwpftfgsgtkleik

SCOPe Domain Coordinates for d6w0gb1:

Click to download the PDB-style file with coordinates for d6w0gb1.
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Timeline for d6w0gb1: