SCOPe 2.07: Domain d6v2cd1: 6v2c D:1-326

Lineage for d6v2cd1 (6v2c D:1-326)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
   consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
   Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
   Domain 2 has parallel beta-sheet of 4 strands, order 1234

4. Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families)

5. Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
   automatically mapped to Pfam PF00710

6. Protein Asparaginase type II [53776] (5 species)

7. Species Escherichia coli [TaxId:562] [53777] (40 PDB entries)

8. Domain d6v2cd1: 6v2c D:1-326 [385859]
   Other proteins in same PDB: d6v2cb2, d6v2cc2, d6v2cd2
   automated match to d1jaza_
   mutant

Details for d6v2cd1

PDB Entry: 6v2c, 2 Å

PDB Description: complex of mutant (k162m) of e. coli l-asparaginase ii with l-asp. covalent acyl-enzyme intermediate and tetrahedral intermediate

PDB Compounds: (D:) L-asparaginase 2

SCOPe Domain Sequences for d6v2cd1:

Sequence; same for both SEQRES and ATOM records:

>d6v2cd1 c.88.1.1 (D:1-326) Asparaginase type II {Escherichia coli [TaxId: 562]}
lpnitilatggdiagggdsatksnytvgkvgvenlvnavpqlkdianvkgeqvvnigsqd
mndnvwltlakkintdcdktdgfvithgtdtmeetayfldltvkcdkpvvmvgamrpsts
msadgpfnlynavvtaadkasanrgvlvvmndtvldgrdvtmtnttdvatfksvnygplg
yihngkidyqrtparkhtsdtpfdvsklnelpkvgivynyanasdlpakalvdagydgiv
sagvgngnlyksvfdtlataaktgtavvrssrvptgattqdaevddakygfvasgtlnpq
karvllqlaltqtkdpqqiqqifnqy

Timeline for d6v2cd1:

• d6v2cd1 is new in SCOPe 2.07-stable
  
• d6v2cd1 appears in the current release, SCOPe 2.08