Lineage for d6stfd_ (6stf D:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2473887Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2473888Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2474875Family c.37.1.8: G proteins [52592] (80 proteins)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. 2475679Protein Rab8a [142293] (2 species)
  7. 2475680Species Human (Homo sapiens) [TaxId:9606] [254870] (7 PDB entries)
  8. 2475694Domain d6stfd_: 6stf D: [384449]
    Other proteins in same PDB: d6stfa2, d6stfb2, d6stfe2
    automated match to d4lhxa_
    complexed with gdp, mg, sep

Details for d6stfd_

PDB Entry: 6stf (more details), 2.4 Å

PDB Description: human rab8a phosphorylated at ser111 in complex with gdp
PDB Compounds: (D:) Ras-related protein Rab-8A

SCOPe Domain Sequences for d6stfd_:

Sequence, based on SEQRES records: (download)

>d6stfd_ c.37.1.8 (D:) Rab8a {Human (Homo sapiens) [TaxId: 9606]}
ylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwdtag
qerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdvn
dkrqvskergeklaldygikfmetsakaninvenafftlardikakmdk

Sequence, based on observed residues (ATOM records): (download)

>d6stfd_ c.37.1.8 (D:) Rab8a {Human (Homo sapiens) [TaxId: 9606]}
ylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwdtay
yrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdvndkrqvskerge
klaldygikfmetsakaninvenafftlardikakmdk

SCOPe Domain Coordinates for d6stfd_:

Click to download the PDB-style file with coordinates for d6stfd_.
(The format of our PDB-style files is described here.)

Timeline for d6stfd_: